Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq130414 100 2e-16 >seq130414 Length=94101111 Score = 100 bits (110), Expect = 2e-16 Identities = 113/150 (75%), Gaps = 1/150 (1%) Strand=Plus/Plus Query 25506 GCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGTACCCCGAACCCCATG 25565 || |||||||| ||||| || |||||||||||||||| |||||||| || | |||||| Sbjct 42658841 GCGATCATGTAGGTGAGCAGGGAGTAGCTGGCGATGTTGAAGGGTACACCCAGGCCCATG 42658900 Query 25566 TCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCTCACGTAAAACTGACA 25625 | | || ||||||||||| ||||| || || || || | | |||||| ||||| || Sbjct 42658901 T-CTCCTGACCTCTGGTACAGCTGGCAGGACAGTTCACCATTCACCACGTAGAACTGGCA 42658959 Query 25626 CATGGTGTAGCACGGAGGAAGAGCTATAAG 25655 | | | ||||||||| || || || || Sbjct 42658960 AAGAGCATGGCACGGAGGCAGGGCCATCAG 42658989 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339028180099125