Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_011357.1 Length=62147 Score E Sequences producing significant alignments: (Bits) Value seq188687 100 1e-16 >seq188687 Length=905 Score = 100 bits (110), Expect = 1e-16 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Plus Query 36283 GTGCTGGTGCATGGTGACCAGCCCCTGATGGCCTGGTGTGTCGGCAATGCCCGGGTGGAG 36342 ||||||||||| || | ||||||| | ||| |||||| || |||||||| ||||||| Sbjct 3 GTGCTGGTGCACGGCGGCCAGCCCATCATGAACTGGTGCGTAGGCAATGCAAAGGTGGAG 62 Query 36343 CCTAAAGGTAACGCCATTCTTATCACCAAACAGGC--CAGTGGACGGGGAAAAATTGACC 36400 || || |||||| | | ||||| |||||||| ||| ||| | || ||||||| Sbjct 63 CCGCGCGGCAACGCCGTAATCATCACGAAACAGGCCGCAGGCAACGCG--AAGATTGACC 120 Query 36401 CGCTGATGGCGCTGTTCAATGCGGTCTCCCTGATGTCCCTTAACCC 36446 ||| ||||| || || || ||||| | || ||||| || ||||| Sbjct 121 TGCTAATGGCTCTTTTTAACGCGGTGACGCTTATGTCGCTGAACCC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198117166997250