Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq113784 86.0 7e-12 >seq113784 Length=115468741 Score = 86.0 bits (94), Expect = 7e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 106492 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCC 106551 |||||| || || ||||||| |||||||| |||| |||| | || ||||| || Sbjct 60440350 CTCATCTTTGCTGGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTTCC 60440291 Query 106552 CAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 106611 || |||| ||||| ||||| || || | ||| |||||||||||||| || || || Sbjct 60440290 CAGGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTACC 60440231 Query 106612 CGTCTCCGTCTGTGACT 106628 ||||| ||||| |||| Sbjct 60440230 TGTCTCTGTCTGAGACT 60440214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588007129855000