Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq36986 215 4e-50 seq101427 192 5e-43 seq152761 179 3e-39 seq136375 159 3e-33 seq52188 158 1e-32 seq113784 122 7e-22 seq86921 91.5 1e-12 seq139997 89.7 4e-12 >seq36986 Length=206538554 Score = 215 bits (238), Expect = 4e-50 Identities = 410/591 (69%), Gaps = 12/591 (2%) Strand=Plus/Plus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| || | ||| ||||||| | | | ||||| ||| Sbjct 111747401 GGCATTGATCTTGGCACCACCTACTCCTATGTGGGTGTTTTCTAGCACAGGAAAGTGGAA 111747460 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||| | ||| || ||| |||| |||||| |||||| | || || || || Sbjct 111747461 ATAATTGCCAACGTTCAGGGAAACCGAACCACTCCAAGTTATGTCGCCTTTACTGACACC 111747520 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTA 550175 |||| || | |||||||| ||||| |||||| || || || || ||||| || Sbjct 111747521 GAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCACCAACACAG 111747578 Query 550176 TTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATA 550235 |||||||||| |||| | |||||| | || || | ||| | ||| || | |||| Sbjct 111747579 TTTTTGATGCCAAACACCTGATTGGACGTAGATTCGACGATGCTGTTGTCCAATCTGATA 111747638 Query 550236 TGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTACTC 550295 ||||||||||||| ||| | || |||| | |||| | || | || ||| || Sbjct 111747639 TGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAG-TAGAA 111747697 Query 550296 ATGAAGGATCTGTTAAACAATTTTCA-CCAGAACAAATTTCATCTATGGTTTTAATGAAA 550354 |||| | || | ||| | ||||| | | || ||||||||||| | || Sbjct 111747698 TACAAGGGAGAGACCAAAAGTTTCTATCCAGAGGAGGTATCTTCTATGGTTTTGACAAAG 111747757 Query 550355 ATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGT 550413 ||||| ||| || |||| |||| |||| ||||| |||| ||| | || || Sbjct 111747758 ATGAAGGAAATCGCAGAGGCTTACCTTGGG-AAGACTGTTACCAATGCTGTAGTCACAGT 111747816 Query 550414 ACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGG 550473 ||| || ||||||||||| || || ||||| ||||| |||||||||||| ||||||||| Sbjct 111747817 ACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCTGG 111747876 Query 550474 ACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT-G 550532 |||||||| ||||| || |||||||| || || |||||||| | || || |||||| | Sbjct 111747877 TCTTAATGTACTTCGAATCATCAATGAGCCAACCGCTGCTGCTATCGCTTA-GGACTTAG 111747935 Query 550533 ATAAACATAAT-GATCAAGAACTTAATGTACTCATCTTTGATTGTGGAGGT 550582 | ||| | | || | | || ||||| || |||||||| | |||||| Sbjct 111747936 ACAAAAAGGTTGGAGCCA-AAAGGAATGTGCTGATCTTTGACTTGGGAGGT 111747985 Score = 100 bits (110), Expect = 2e-15 Identities = 154/213 (72%), Gaps = 10/213 (5%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| | ||| |||| ||| ||||| |||| | ||| | | |||||| Sbjct 16385400 ACGAGATGAAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTTCC 16385343 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||| || || ||||| || || || |||| ||||||||||||| |||| ||||| ||| Sbjct 16385342 AGTTGCTTGCCAGCAAAGATCAGACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTGA 16385283 Query 563386 ATTTTTTGTTT--TACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAACAGT 563441 || || ||| |||| || |||||||| || || | || || | | | | || Sbjct 16385282 ATCTTGGCTTTCATACT--TTCTATTGTATCCGAGGGTTCG-AC-CTCAACACTGATGGT 16385227 Query 563442 TTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || ||||| ||||| || ||||||||||| Sbjct 16385226 CTTTCCTGTAAGGGTTTTCACAAAAATTTGCAT 16385194 >seq101427 Length=159252932 Score = 192 bits (212), Expect = 5e-43 Identities = 463/691 (67%), Gaps = 10/691 (1%) Strand=Plus/Minus Query 551913 ACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGTA 551972 ||||||||||| | |||| || | ||||| || | ||||| ||| |||||| || Sbjct 39046151 ACTGCTTGCGAGCGCACCAAGCGCACACTTTCTTCCAGCACTCAGGCCAGTATTGAGGTT 39046092 Query 551973 GATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGAT 552032 ||||| ||| ||| ||||| || | | |||| ||||| | | ||| |||||||| Sbjct 39046091 GATTCTCTATATGAAGGAATGGACTTTTATACTTCTATTACTCGTGCCTGGTTTGAAGAA 39046032 Query 552033 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTCA 552092 | | |||| || || | | | || || ||||| ||| | | ||| | Sbjct 39046031 TTAAATGCTGACCTGTTCCGTGGCATCCTGGACCCTGTAGAGAAAGCCCTTCGGGATGCC 39045972 Query 552093 AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGG-TGGATCTACAAGAATTCC 552151 ||| |||| || || | | || || ||||| |||| ||| ||| ||| |||| || || Sbjct 39045971 AAGTTTGACAAGTCTCAGATCCACGATATTGT-CTTGATGGGTGGTTCTGCAAGTATCCC 39045913 Query 552152 TAAAATTCGCGAAATGTTA-AGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 || |||| || | || | ||| ||||||||| || || | ||| | || | | Sbjct 39045912 CAAGATTCAGAAACTTCTACAAGACTT-TTTCAATGGGAAGGAACTGAATAAGAGCATCA 39045854 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG--GACA 552268 | || ||||||||||| || |||||||| || | || ||||| || ||||||| |||| Sbjct 39045853 ACCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGACA 39045794 Query 552269 AA-CTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 || |||| ||| ||| ||| || | | || | ||||| |||| ||| |||||| | Sbjct 39045793 AATCTGA--AAATACT-CAAGATTTGCTGCTGTTGGATGTCACTCTTCTTTCTCTTCGCA 39045737 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | ||||| | ||| || | |||||| ||| ||| | |||||||| |||||| | Sbjct 39045736 TTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACCA 39045677 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 || | | | || |||| || || || || || ||| ||| ||||| ||| Sbjct 39045676 AACATACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTTT 39045617 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 |||||| || | | || || ||||| || | |||||| | ||| | | || Sbjct 39045616 ATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTTTGAACTCACAG 39045557 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 | || |||||||| || || || || || || |||| ||||| || ||||| ||||| | Sbjct 39045556 GCATACCTCCTGCCCCCCGGGGTGTTCCTCAGATTGGGGTTACCTTTGATATTGATGCTA 39045497 Query 552568 ATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||| ||| | | ||| ||||| ||||| Sbjct 39045496 ATGGCATTCTCAGTGTCTCTGCTGTGGATAA 39045466 Score = 149 bits (164), Expect = 5e-30 Identities = 361/536 (67%), Gaps = 28/536 (5%) Strand=Plus/Minus Query 550001 ATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATT 550060 || ||| | || ||||| || ||||| ||||| | || | || ||||| ||||| Sbjct 39046906 ATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAAATA 39046847 Query 550061 ATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAA 550120 || ||||| ||||| || ||| |||| || ||| |||||| | || || || |||||| Sbjct 39046846 ATCGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTACTGACACTGAA 39046787 Query 550121 CATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTACCAATACTATTT 550178 | || ||||| ||||| |||||| || || ||||| ||| || ||| Sbjct 39046786 CTATT-------GATGCTGCAAAGAATCAAGTTGCAATG--AATCC---CAACACAGTTT 39046739 Query 550179 TTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGATATGA 550238 ||||||| |||| | | |||||| | || || | || | | || | ||||||| Sbjct 39046738 TTGATGCCAAACATCTGATTGGAGGTAGATTCGACAATGCTGTCATCCAATCTGATATGA 39046679 Query 550239 AGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC----TACT 550294 |||||||||| ||| | || || | |||| | || | | ||| ||| Sbjct 39046678 AGCATTGGCCCTTCATGGTGGTGAACAATGCTGGCAGGCCCAAGGTCCAAGTAGAATACG 39046619 Query 550295 CATGAAG-GATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAA 550353 | |||| || | ||| || | ||||| | | || ||||||||||| | || Sbjct 39046618 -AGGAAGAGACC----AAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTTGACAAA 39046564 Query 550354 AATGAAACAAA-CAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACT 550411 ||||| ||| || || |||| |||| |||| ||||| |||| ||| | || Sbjct 39046563 GATGAAGGAAATCACAGAG-GCTTACCTTGGG-AAGACTGTTACCAATGCTGTAGTCACA 39046506 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 | ||| || |||||||| | || || | | | ||||| ||| |||||||| ||||||| Sbjct 39046505 GCACCTGCCTATTTTAACAAGTCTCAGCATTAGGCTACCAAACATGCTGGAAATATTGCT 39046446 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 || |||||||| || || || |||| ||| || ||||||||||| |||| ||||| Sbjct 39046445 GGTCTTAATGTACTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATGG 39046390 >seq152761 Length=70119229 Score = 179 bits (198), Expect = 3e-39 Identities = 382/562 (68%), Gaps = 9/562 (2%) Strand=Plus/Minus Query 550025 TGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGA 550084 ||||| ||||| | || | || ||||| ||||| |||||||| ||||| || ||| | Sbjct 21472302 TGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAAATAATTGCCAACGATCAGGGAAACCAA 21472243 Query 550085 ACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || || ||| |||||| | || || || || |||| || |||||||||| ||||| Sbjct 21472242 ACCACCCCAAGTTATGTCACCTTTACTGACACAGAACGATTGATTGGTGATGCTGCAAAG 21472183 Query 550145 TATCAAGC--CACTGGTAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAA 550202 |||||| || || || || ||| | || |||||||||| ||||| | | |||| Sbjct 21472182 AATCAAGTTGCAATG--AACCCCACCGACACAGTTTTTGATGCCAAACGCCTGACTGGAC 21472125 Query 550203 GAAGTTTTAATGATTCGACTGTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTA 550262 | || ||| ||||| | ||| | | ||||||||||||||||| ||| || | Sbjct 21472124 GTAGATTTGATGATGCTGTTGTCCGATCTGATATGAAGCATTGGCCCTTCATGGCGGTGA 21472065 Query 550263 ATGTTTCTGGAAAACCTTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTT-TCA 550321 ||| | |||| | || | | ||| || |||| | || | ||| | Sbjct 21472064 ATGATGCTGGCAGGCCCAAGGTCCAAG-TAGAATACAAGGGAGAGACCAAAAGTTTCTAT 21472006 Query 550322 CCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTT 550381 |||| | | || |||||||| || | || ||||| ||| || |||| || Sbjct 21472005 TCAGAGGAGGTGTCTTCTATGGTCTTGACAAAGATGAAGGAAATCGCAGAGGCTTACCTT 21471946 Query 550382 GGTCAAGA-AGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACG 550440 || | || ||||| |||| ||| | || ||||| || |||||||| || || || | Sbjct 21471945 GG-GAGGACTGTTACCAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGTG 21471887 Query 550441 TCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGA 550500 ||| ||||| |||||||||||| || |||||| |||||||| ||| | || |||| ||| Sbjct 21471886 TCAGGCTACCAAAGATGCTGGAACTACTGCTGGTCTTAATGTACTTTGAATCATCACTGA 21471827 Query 550501 ACCTACTGCTGCTGCACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGT 550560 || ||||||||| | |||| ||||| | || ||| | || ||| ||||| Sbjct 21471826 GCCCACTGCTGCTAC-TTTGCTTATGGCTTAGACAAAAAGGTTGGAGCCGAAAGGAATGT 21471768 Query 550561 ACTCATCTTTGATTGTGGAGGT 550582 || |||||||| | |||||| Sbjct 21471767 GCTGATCTTTGACTTGGGAGGT 21471746 Score = 100 bits (110), Expect = 2e-15 Identities = 258/391 (66%), Gaps = 4/391 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || ||||||||||| || |||||||| || | || ||||| || ||||||||| | Sbjct 21471263 AACCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGAC 21471204 Query 552270 ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTA 552329 | ||||||| | ||| | | | || | ||||| |||| ||| |||||||| | Sbjct 21471203 AAATATGAAAATGTTCAAGGTTTGCTGCTGTTGGATGTCACTCGTCTTTCTCTTGGCGTT 21471144 Query 552330 GAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTAAA 552389 ||||| | || || | |||||| ||| ||| | |||||||| |||||| ||| Sbjct 21471143 GAAACTGCCGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACCAAA 21471084 Query 552390 AAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTTTT 552449 | | | | || | || || || || || ||| ||| | || ||| | Sbjct 21471083 CAGACCCAAACCCTCACTTCCTACTCTGACAACCAGCCTGGTGTGCTCACTCGGGTTTAT 21471024 Query 552450 GAAG--GAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 |||| ||| | | | | || || |||| || | |||||| | ||| | | || Sbjct 21471023 GAAGGTGAGCATGCCA--TGACCAAGAATAACAACCTACTTGGCAAGTTTGAACTCACAG 21470966 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 | || |||||| || | ||| || || || ||||| || || || ||||| ||| | | Sbjct 21470965 GCATATGTCCTGCCCCCCATGGCGTTCCTCAGATTGAGGTCACCTTTGATATTGATACTA 21470906 Query 552568 ATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 |||| ||| | ||||| ||||| ||||| Sbjct 21470905 ATGGCATTCTCAATGTCTCTGCTGTGGATAA 21470875 >seq136375 Length=94492513 Score = 159 bits (176), Expect = 3e-33 Identities = 368/545 (68%), Gaps = 16/545 (3%) Strand=Plus/Plus Query 550049 AAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTC 550108 ||||| ||||| |||||||| ||||| || ||| |||| || ||| ||| || | || Sbjct 1869736 AAAGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTACGTAGCCTTT 1869795 Query 550109 ACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATCCTA 550166 || || ||||||| || | |||||||| ||||| |||||| || || || || | Sbjct 1869796 ACTGATACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATG--AACCCCA 1869853 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 |||| || |||||||||| ||||| | ||||| | | ||| | ||| | ||| | Sbjct 1869854 CCAACACAGTTTTTGATGCCAAACGCCTGATTGGGTGTGGATTTGACGATGCTGTTGTCC 1869913 Query 550227 AGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG 550286 | | ||||||||||| ||||| || | || |||| | |||| | || | | Sbjct 1869914 AATCTGATATGAAGCACTGGCCCCTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCC 1869973 Query 550287 AAGCTACTCATGAAGGATCTGTTAAACAATTT-TCACCAGAACAAATTTCATCTATGGTT 550345 ||| || |||| | || | ||| | ||||| | | || ||||||||| Sbjct 1869974 AAG-TAGAATACAAGGGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTT 1870032 Query 550346 TTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGA-AGTTACGGATGCAGT 550404 || | || || || ||| || |||| |||| |||| ||||| |||| | Sbjct 1870033 TTGACAAAGATAAAGGAAATCGCAGAGGCTTACCTTGG-GAAGACCGTTACCAATGCTAT 1870091 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | | || ||||| || |||||||| | | || ||||| ||||| |||||||||||| Sbjct 1870092 AGTCACAGTACCTGCCTATTTTAACAATGCTCAGCGTCAGGCTACCAAAGATGCTGGAAC 1870151 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATG------AACCTACTGCTGCTGCACT 550518 ||||||||| |||||||| ||| | || ||||| | | || ||||||||||| | Sbjct 1870152 TATTGCTGGTCTTAATGTACTTTGAATCATCAAAGTACAGCAGCCAACTGCTGCTGCTAT 1870211 Query 550519 TGCATATGGACTTGATAAACATAAT-GATCAAGAACTTAATGTACTCATCTTTGATTGTG 550577 || ||||| | || ||| | | || | | || ||||| || |||||||| | | Sbjct 1870212 TGGTTATGGCTTAGAGAAAAAGGTTGGAGCCA-AAAGGAATGTGCTGATCTTTGACTTGG 1870270 Query 550578 GAGGT 550582 ||||| Sbjct 1870271 GAGGT 1870275 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||| ||||| ||||| | ||||| || || || Sbjct 84124370 GTTACCCATGCAGTTGTTACTGTACCAGCCTATTTCAATGATGCCCAACGCCAGGCAACC 84124311 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | |||||| | | || |||||||| || Sbjct 84124310 AAAGATGCTGGAACTATTGCTGGATTGAATGTTATGAGAATCATCAATGAGCC 84124258 >seq52188 Length=152998503 Score = 158 bits (174), Expect = 1e-32 Identities = 336/497 (68%), Gaps = 10/497 (2%) Strand=Plus/Minus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 ||||| || || || |||||||| || || || ||| | || || || ||||| | Sbjct 30988119 GGTAAGGTAGAGATCATTGCCAACGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCC 30988060 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC--CACTGGTAATC 550163 ||||| || || |||| | |||| ||||| || || | || | || || |||| Sbjct 30988059 TTCACTGACACGGAACGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCAATG--AATC 30988002 Query 550164 CTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTG 550223 | || ||| | ||||| || |||||| | ||||| || | ||||||||| | | Sbjct 30988001 CCCAGAACACTGTCTTTGACGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAG 30987942 Query 550224 TTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATA 550283 | |||||||||||||| || |||||||| ||| | | |||| || || || | Sbjct 30987941 TGCAGGCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGG 30987882 Query 550284 TTGAAGCTACTCATGAAGGATCTGTTAAACAAT-TTTCA--CCAGAACAAATTTCATCTA 550340 | || | | |||| | ||| || |||| || || |||| || |||| Sbjct 30987881 TAACAGTGTCCTACAAAGGG---GAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTA 30987825 Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 |||| | | || ||||| | || || || ||| | || || || || ||| Sbjct 30987824 TGGTACTGACAAAGATGAAGGAGACTGCTGAGGCCTTTTTGGGCCACCCTGTCACCAATG 30987765 Query 550401 CAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTG 550460 | || |||||||| ||||| ||||| ||||| || || |||||||| || || ||||| | Sbjct 30987764 CTGTGATAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAG 30987705 Query 550461 GACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTG 550520 | ||||| || || ||||| || | |||||||||||||| || |||||||| ||| Sbjct 30987704 GTGTGATTGCGGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTG 30987645 Query 550521 CATATGGACTTGATAAA 550537 ||||||| | |||||| Sbjct 30987644 CATATGGCTTAGATAAA 30987628 Score = 98.7 bits (108), Expect = 8e-15 Identities = 127/174 (73%), Gaps = 1/174 (1%) Strand=Plus/Minus Query 552210 AATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGACAA 552269 || || |||||||||||||| |||| ||| || || ||||| |||||||||||| || Sbjct 44585385 AACCCTGATGAGGCTGTTGCTTATGATGCAGCTGCCCAGGCAGCCATTCTTTCTGGAGAA 44585326 Query 552270 ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTTTA 552329 | ||||||| | ||| || | | || | |||| |||||||| |||||||| | Sbjct 44585325 ATATATGAAAATGTTCAAGATTTGCTGCTGTTGAATGTCACTCCTCTTTCTCTTGGCATT 44585266 Query 552330 GAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCT 552383 ||||| | |||| | |||||| | |||||| | | ||||| || |||||| Sbjct 44585265 GAAACTGGCAGAGGAGTCATGACTGA-CTTATCAAGGGCAATACCACCATTCCT 44585213 >seq113784 Length=115468741 Score = 122 bits (134), Expect = 7e-22 Identities = 109/137 (80%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| |||| ||| | || ||||| || |||||||| || || || ||||| ||||| Sbjct 20285331 GTTACTAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACC 20285272 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCT 550510 |||||||||||| ||||||||| |||||||| || || || |||||||| || || ||| Sbjct 20285271 AAAGATGCTGGAACTATTGCTGGTCTTAATGTACTGCGAATCATCAATGAGCCAACAGCT 20285212 Query 550511 GCTGCACTTGCATATGG 550527 ||||| | || ||||| Sbjct 20285211 GCTGCTATCGCTTATGG 20285195 >seq86921 Length=222198629 Score = 91.5 bits (100), Expect = 1e-12 Identities = 141/199 (71%), Gaps = 7/199 (4%) Strand=Plus/Minus Query 552180 TTCAATGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCC 552239 |||||||| ||| || | ||| | || | || || |||||||||||||| ||||||| Sbjct 109686201 TTCAATGGGAAAGAAATGAATAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGTA 109686142 Query 552240 GCAATTCAAGCAGCTATTCTTTCTG--GACAAACTGATGAAAAACTACAAAATATTGTAC 552297 || | || |||||| | ||||||| |||||| | |||||| | || || | | | Sbjct 109686141 GCTTTCCAGGCAGCTGTCCTTTCTGGAGACAAATT--TGAAAATGTTAAAGATTTGCTGC 109686084 Query 552298 TTGTAGATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATC 552357 | | ||||| |||||| |||||| | || ||||| |||||| | |||||| | Sbjct 109686083 TGTTGGATGTCACTCCT---TCTCTTAGCTTTGAAACTTCTGGAGGAGTCATGACTGTCC 109686027 Query 552358 TTATCGATAGAAATACTAC 552376 | ||| | | |||||||| Sbjct 109686026 TCATCAAGTGCAATACTAC 109686008 >seq139997 Length=61081816 Score = 89.7 bits (98), Expect = 4e-12 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || ||||| || || ||| | | ||| || |||||||||| ||| Sbjct 9478693 CCTCAGACGAAGAACCAGATGGAGAGTGGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 9478750 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||| || || || ||||| |||||||| || Sbjct 9478751 GTGCGGCCATCTTCCAGCTGCTTGCCCGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATG 9478810 Query 563371 CCTTCTTTATCTTGAATTTT 563390 |||||||||||||| || || Sbjct 9478811 CCTTCTTTATCTTGGATCTT 9478830 Score = 89.7 bits (98), Expect = 4e-12 Identities = 105/140 (75%), Gaps = 4/140 (3%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGA 563310 ||| ||||| || || || || ||||| ||| | | ||| || |||||||||| ||| Sbjct 9479149 CCTCAGACGCAGGACCAGGTGCAGGGTCGACTCTTTCTGG--ATGTTGTAATCAGAAAGA 9479206 Query 563311 GTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATT 563370 || | |||||| || || || || ||||| || || || ||||| |||||||| || Sbjct 9479207 GTGCGGCCATCTTCCAGCTGCTTGCCTGCAAAGATGAGCCTCTGCTGGTCAGGAGGGATG 9479266 Query 563371 CCTTCTTTATCTTGAATTTT 563390 |||||||||||||| || || Sbjct 9479267 CCTTCTTTATCTTGGATCTT 9479286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4015142783011250