Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq152761 95.1 2e-14 >seq152761 Length=70119229 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/211 (70%), Gaps = 8/211 (4%) Strand=Plus/Plus Query 2248 AGAATCGGATCTGCGAGATCCATCTGACCTGTTCTGTCGAGGATCCCAATGACAACATCT 2307 ||||| ||| ||| |||||||| |||||||| ||||| ||| || |||||| ||| | Sbjct 64964208 AGAATGGGACCTGTGAGATCCACCTGACCTGCTCTGTGGAGAATATGAATGACGACAACC 64964267 Query 2308 CCTTCAAATGGGAGGCCTTGGGCAAGACGCTTCT----ACGCGAGCCCAACCTCACGACC 2363 | | ||||||| | ||| || || | | | | || |||||||||| Sbjct 64964268 TAGTAAGGTGGGAGGTC----GCAGGAAGCATATCTATAAGAGAAGCCAACCTCACTCTG 64964323 Query 2364 TCCTGGGACCCCAGGAACAGCAGTGAGCAGAACTACACGTGCATCGCCGAAAACGCTGTG 2423 ||||||||||||| |||| ||| || |||| ||||| ||||| || || || |||| Sbjct 64964324 TCCTGGGACCCCAAGAACTCCAGCGAAAAGAAGTACACCTGCATAGCTGAGAATCCTGTC 64964383 Query 2424 AGCAATCTCTCTTTCACGGTCTCGGCCCAGA 2454 ||| | || || ||| | || || |||||| Sbjct 64964384 AGCCAACTGTCCTTCTCTGTTTCCACCCAGA 64964414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627178051045000