Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq36986 224 6e-53 seq152761 174 1e-37 seq136375 174 1e-37 seq101427 174 1e-37 seq52188 161 6e-34 seq113784 113 3e-19 seq86921 109 4e-18 seq90122 104 2e-16 >seq36986 Length=206538554 Score = 224 bits (248), Expect = 6e-53 Identities = 377/538 (70%), Gaps = 8/538 (1%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| | ||| | ||||| | | | || Sbjct 111747394 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTATGTGGGTGTTTTCTAGCACAGGAA 111747453 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| | || || || |||| || ||| ||||| | ||||| Sbjct 111747454 AGTGGAAATAATTGCCAACGTTCAGGGAAACCGAACCACTCCAAGTTATGTCGCCTTTAC 111747513 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| || |||| | || || |||||||| || |||||| |||| || || || Sbjct 111747514 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCACCAA 111747573 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| |||| || || ||| | ||||||||| Sbjct 111747574 CACAGTTTTTGATGCCAAACACCTGATTGGACGTAGATTCGACGATGCTGTTGTCCAATC 111747633 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAG- 474626 ||||||| |||||||| || | |||| | |||| || ||| | || | || ||| Sbjct 111747634 TGATATGAAGCATTGGCCCTTCATGGTGGTGAATGATGCTGGCAGGCCCAAGATCCAAGT 111747693 Query 474627 -CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTA 474685 |||||| | || || || ||| || | || || | | ||||| |||||||| Sbjct 111747694 AGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTATCTTCTATGGTTTTG 111747751 Query 474686 GCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAA 474743 | || ||||| ||| ||| ||| | || ||||| |||| || || |||| ||| Sbjct 111747752 ACAAAGATGAAGGAAATCGCAGAG-GCTTACCTTGG-GAAGACTGTTACCAATGCTGTAG 111747809 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || || ||||||||||||||||| ||||| || || |||||||| |||| | Sbjct 111747810 TCACAGTACCTGCCTATTTTAATGATTCTCAGCGTCAGGCTACCAAAGATGCTGGAACTA 111747869 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTA 474861 |||| ||||||||||| | || || || ||||| ||||| || || || | ||||| Sbjct 111747870 TTGCTGGTCTTAATGTACTTCGAATCATCAATGAGCCAACCGCTGCTGCTATCGCTTA 111747927 Score = 98.7 bits (108), Expect = 6e-15 Identities = 486/761 (64%), Gaps = 12/761 (2%) Strand=Plus/Plus Query 475505 GAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTTGATTCTCTT 475564 || || || ||||| | ||||||| || || | | | |||| |||||||||| Sbjct 111748178 GAGCGCGCCAAGCGTACATTTTCTTCCAGCACCCAGGCCAGTATTGAGATTGATTCTCTA 111748237 Query 475565 TTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGATATTTGTTCT 475624 | |||||||| || | |||| |||||| | || |||||||| | || Sbjct 111748238 TACGAAGGAATCGACTTCTATACCTCTATTACTCGTGCCCGGTTTGAAGAATTAAACGCT 111748297 Query 475625 GATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGAC 475684 || || || | || | || || || || ||| || | ||| | || || ||| Sbjct 111748298 GACCTGTTCCGTGGCACCCTGGACCCTGTAGAGAAAGCCCTTCGGGATGCCAAGCTAGAC 111748357 Query 475685 AAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGA 475744 || || || |||| || ||||| | || || || || ||| | || || || || | Sbjct 111748358 AAGTCTCAGATCCACGATATTGTCTTGGTGGGTGGCTCTACACGTATCCCCAAGATTC-A 111748416 Query 475745 GAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGA 475803 || | | || | |||| ||||| || | | ||| | || | || |||| ||| Sbjct 111748417 GACACTTCTACAAGACTTTTTCAATGGGAAGGAACTGAATAAGAGCATCAACCCTGCTGA 111748476 Query 475804 AGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAA 475863 |||| || ||||| || ||||| || ||||| || | || || | || | ||| Sbjct 111748477 GGCTGGCGCTTATGGTGCAGCTGTGCAGGCAGCCATCCTTTCTGGAGA--CAAATCTGAA 111748534 Query 475864 ACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAACAGT 475920 | | || ||| | || ||||| | || ||||| ||||| | || ||||||| | Sbjct 111748535 AATGTTCAAGATT-TGCTGCTGTTGGATGTCACTCCCCTTTCTCTTGGCATTGAAACCGC 111748593 Query 475921 TGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAA 475980 ||| || | |||||| ||| || | |||||| | || || |||| | | | Sbjct 111748594 TGGTGGAGTCATGACTGTTCTCATCAAGCTCAATACTACCATTCCTACCAAACAGACCCA 111748653 Query 475981 AGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAGGTGA 476040 | || | || || | ||| | || | ||| ||| || | ||||||||| Sbjct 111748654 AACCTTCACTACCTACTATGACTACCAGCCTGGTGTGCTCATTCAGGTTCATGAAGGTGA 111748713 Query 476041 AAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCC 476100 | | || || ||||| ||| ||| || | ||| | || ||| || ||||| Sbjct 111748714 GTGTGCCATGACCAAGGATAACAACCTACTGGGCAAGTTTGAACTCACAGGCATACCTCC 111748773 Query 476101 TGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCT 476160 ||| ||| || |||||||| || || || || |||||||||||||| ||||| ||||| Sbjct 111748774 TGCCCCCCATGGTGTTCCTCAGATAGAGGTCACCTTTGATATTGATGCTAATGGCATTCT 111748833 Query 476161 TAATGTTACTGCTTGTGATAA-ATC-TAGTAACAAGAGTAAAAATATAACTATTACAAAC 476218 ||||| ||||| ||||| | | || || ||||| ||||| || || || |||||| Sbjct 111748834 CAATGTCTCTGCTGTGGATAAGAGCACAGGAA-AAGAG-AAAAAGATCACCATCACAAAC 111748891 Query 476219 AATCGTGGTAGATTTACTGAAGAACAAATTCAACGTATGGT 476259 | ||| | || | || ||| | ||| | || ||||| Sbjct 111748892 GACAAAGGTCGCTTGAGCGAGGAAGACATTGAGCGCATGGT 111748932 Score = 95.1 bits (104), Expect = 8e-14 Identities = 146/206 (71%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 480564 ACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCA 480623 || |||||||||| ||| |||| ||| || || |||| | ||| | |||||| Sbjct 16385400 ACGAGATGAAGTGGACTC-CTTTTGAATG-TTGTAGTCAGACAAAGTACGTCCATCTTCC 16385343 Query 480624 AGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGA 480683 |||||||| |||||||| || |||| || | ||||||||||||| ||||||| || ||| Sbjct 16385342 AGTTGCTTGCCAGCAAAGATCAGACTCTGCTCATCAGGAGGAATTTCTTCCTTATCCTGA 16385283 Query 480684 ATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTA 480743 ||||| ||| | | ||| || ||||| | | || |||| | || || || Sbjct 16385282 ATCTTGGCTTTCATACTTTCTATTGTATCCGAGGGTTCGACCTCAACACTGATGGTCTTT 16385223 Query 480744 CCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || |||||||| Sbjct 16385222 CCTGTAAGGGTTTTCACAAAAATTTG 16385197 >seq152761 Length=70119229 Score = 174 bits (192), Expect = 1e-37 Identities = 348/507 (69%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 474362 TGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGA 474421 ||||| | ||| | || | || ||||| |||||||||||||| || || || || | Sbjct 21472302 TGTGTGGGTGTCTTCCAGCACGGGAAAGTGGAAATAATTGCCAACGATCAGGGAAACCAA 21472243 Query 474422 ACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAA 474481 || || ||| ||||| | |||||||| || |||| | ||||| |||||||| || Sbjct 21472242 ACCACCCCAAGTTATGTCACCTTTACTGACACAGAACGATTGATTGGTGATGCTGCAAAG 21472183 Query 474482 TATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGT 474541 |||||| |||| || || | || |||||||||| ||| | ||| ||| ||| Sbjct 21472182 AATCAAGTTGCAATGAACCCCACCGACACAGTTTTTGATGCCAAACGCCTGACTGGACGT 21472123 Query 474542 AATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAAT 474601 | ||||||||| | ||||| |||||||||| |||||||| || | || | | ||| Sbjct 21472122 AGATTTGATGATGCTGTTGTCCGATCTGATATGAAGCATTGGCCCTTCATGGCGGTGAAT 21472063 Query 474602 GTTGGTGGTAAACCATATATAGAAG--CAATACACGCAGGTGAAACTAAACAATTTTCAC 474659 | || ||| | || | | ||| |||||| | || || || ||| || | Sbjct 21472062 GATGCTGGCAGGCCCAAGGTCCAAGTAGAATACAAG--GGAGAGACCAAAAGTTTCTATT 21472005 Query 474660 CGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTT 474718 | || | | ||||| ||||| || | || ||||| ||| ||| ||| | || ||| Sbjct 21472004 CAGAGGAGGTGTCTTCTATGGTCTTGACAAAGATGAAGGAAATCGCAGAG-GCTTACCTT 21471946 Query 474719 GGACAAGA-AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACG 474777 || | || || || |||| ||| | || || || || |||||||| |||||||| | Sbjct 21471945 GG-GAGGACTGTTACCAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGTG 21471887 Query 474778 TCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGA 474837 ||| || || |||||||| |||| | ||| ||||||||||| | | || || | ||| Sbjct 21471886 TCAGGCTACCAAAGATGCTGGAACTACTGCTGGTCTTAATGTACTTTGAATCATCACTGA 21471827 Query 474838 ACCAACAGCAGCCGCACTTGCTTATGG 474864 || || || || | |||||||||| Sbjct 21471826 GCCCACTGCTGCTAC-TTTGCTTATGG 21471801 >seq136375 Length=94492513 Score = 174 bits (192), Expect = 1e-37 Identities = 343/499 (69%), Gaps = 14/499 (3%) Strand=Plus/Plus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTG---TTTGGCAAAATGG 474384 |||| |||| |||| | | || || || ||| |||||| | || | | ||| | | Sbjct 1869678 TGCAGTTGGCATTGGTCTTGGCACCACCTACTCTTGTGTGGGTGCCTTCTAGCACA---G 1869734 Query 474385 TAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTT 474444 ||||| |||||||||||||| || || || || |||| || ||| || || | || Sbjct 1869735 GAAAGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACCCCAAGTTACGTAGCCTT 1869794 Query 474445 TACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGT 474504 |||||| ||||||| | || || |||||||| || |||||| |||| || || Sbjct 1869795 TACTGATACTGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCAATGAACCCCAC 1869854 Query 474505 TAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCA 474564 || || |||||||||| ||| | ||||||| || ||||| ||| | |||||| Sbjct 1869855 CAACACAGTTTTTGATGCCAAACGCCTGATTGGGTGTGGATTTGACGATGCTGTTGTCCA 1869914 Query 474565 ATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGA 474624 |||||||||| || ||||| | | |||| | |||| || ||| | || | | | Sbjct 1869915 ATCTGATATGAAGCACTGGCCCCTCATGGTGGTGAATGATGCTGGCAGGCCCAAGGTCCA 1869974 Query 474625 AG--CAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTT 474682 || |||||| | || || || ||| || | || || | | ||||| |||||| Sbjct 1869975 AGTAGAATACAAG--GGAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTT 1870032 Query 474683 TTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAG 474740 || | || || || ||| ||| ||| | || ||||| |||| || || |||| Sbjct 1870033 TTGACAAAGATAAAGGAAATCGCAGAG-GCTTACCTTGG-GAAGACCGTTACCAATGCTA 1870090 Query 474741 TAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAA 474800 || | || || || || |||||||| || |||| ||||| || || |||||||| |||| Sbjct 1870091 TAGTCACAGTACCTGCCTATTTTAACAATGCTCAGCGTCAGGCTACCAAAGATGCTGGAA 1870150 Query 474801 GAATTGCAGGTCTTAATGT 474819 ||||| ||||||||||| Sbjct 1870151 CTATTGCTGGTCTTAATGT 1870169 Score = 89.7 bits (98), Expect = 3e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 476035 AGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTAT 476094 ||||||| || | || ||||| ||| || || ||||||||| |||| || || Sbjct 84122223 AGGTGAACGACCCCTGACCAAAGACAATCACCTTCTGGGAACTTTTGATCTGACTGGAAT 84122164 Query 476095 TCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGG 476154 ||||||||||||| | || || || || |||||||| || ||||| || |||| ||||| Sbjct 84122163 TCCTCCTGCTCCCCGTGGGGTCCCACAGATTGAAGTCACCTTTGAAATCGATGTGAATGG 84122104 Query 476155 TATTCTTAATGTTACTGCT 476173 ||||||| || || ||| Sbjct 84122103 CATTCTTAGAGTGACAGCT 84122085 >seq101427 Length=159252932 Score = 174 bits (192), Expect = 1e-37 Identities = 399/594 (67%), Gaps = 14/594 (2%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| ||| |||||| | || || || ||| ||||| | ||| | || | || || Sbjct 39046916 TGCAGTTGACATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTCTTCCAGCACGGGAA 39046857 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||| ||||| || || || || |||| || ||| ||||| | ||||| Sbjct 39046856 AGTGGAAATAATCGCCAACGATCAGGGAAACCGAACCACCCCAAGTTATGTCGCCTTTAC 39046797 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||||| ||||| ||||||| || |||||| |||| ||||| || Sbjct 39046796 TGACACTGAAC----TATTG---ATGCTGCAAAGAATCAAGTTGCAATGAATCCC---AA 39046747 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 || |||||||||| ||| ||||||| ||| || || || | ||||||| Sbjct 39046746 CACAGTTTTTGATGCCAAACATCTGATTGGAGGTAGATTCGACAATGCTGTCATCCAATC 39046687 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGC 474627 ||||||| |||||||| || | |||| | || || ||| | || | | ||| Sbjct 39046686 TGATATGAAGCATTGGCCCTTCATGGTGGTGAACAATGCTGGCAGGCCCAAGGTCCAAGT 39046627 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 | | ||| | || || ||| || | || || | | ||||| |||||||| | Sbjct 39046626 AGAATACGAGGAAGAGACCAAAAGTTTCTATCCAGAGGAGGTGTCTTCTATGGTTTTGAC 39046567 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATT 474745 || ||||| ||| | | ||| | || ||||| |||| || || |||| ||| | Sbjct 39046566 AAAGATGAAGGAAATCACAGAG-GCTTACCTTGG-GAAGACTGTTACCAATGCTGTAGTC 39046509 Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805 || | || || |||||||| | ||||| | | | || || ||| |||| |||| ||| Sbjct 39046508 ACAGCACCTGCCTATTTTAACAAGTCTCAGCATTAGGCTACCAAACATGCTGGAAATATT 39046449 Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 || ||||||||||| |||| || || | ||| ||||| || || || |||||||||| Sbjct 39046448 GCTGGTCTTAATGTACTACGAATCATCAGTGAGCCAACTGCTGCTGCTATTGCTTATGGC 39046389 Query 474866 CTTGATAAGAATTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 | || || || || ||| ||||| || |||||||| | |||||| Sbjct 39046388 TTAGACAAAAAGGTTGGAGCTGAAAGGAATGTGTTGATCTTTGACTTGGGAGGT 39046335 Score = 165 bits (182), Expect = 5e-35 Identities = 457/691 (66%), Gaps = 10/691 (1%) Strand=Plus/Minus Query 475496 ACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACTGTTGAAGTT 475555 |||||||| || || | ||||| | |||||||| ||||| | | | |||| ||| Sbjct 39046151 ACTGCTTGCGAGCGCACCAAGCGCACACTTTCTTCCAGCACTCAGGCCAGTATTGAGGTT 39046092 Query 475556 GATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAATTTGAAGAT 475615 |||||||| | ||||||||| || | | ||||| |||||| | || |||||||| Sbjct 39046091 GATTCTCTATATGAAGGAATGGACTTTTATACTTCTATTACTCGTGCCTGGTTTGAAGAA 39046032 Query 475616 ATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTCAGAGATTCT 475675 | | |||| || || | | | || || || || ||| || | ||| | Sbjct 39046031 TTAAATGCTGACCTGTTCCGTGGCATCCTGGACCCTGTAGAGAAAGCCCTTCGGGATGCC 39045972 Query 475676 AAACTTGACAAATCACAAGTCCATGAAATTGTTCTTG-TAGGAGGTTCAACAAGAATTCC 475734 || ||||||| || || |||| || ||||| |||| | || ||||| |||| || || Sbjct 39045971 AAGTTTGACAAGTCTCAGATCCACGATATTGT-CTTGATGGGTGGTTCTGCAAGTATCCC 39045913 Query 475735 AAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATGAAAGTGTAA 475793 || || ||||| | || | |||| ||||| || | | ||| | || | | Sbjct 39045912 CAAGATTC-AGAAACTTCTACAAGACTTTTTCAATGGGAAGGAACTGAATAAGAGCATCA 39045854 Query 475794 ATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAAT 475853 | |||||||| ||||| || ||||| || |||||||| ||||| || | || || | Sbjct 39045853 ACCCTGATGAGGCTGTCGCTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGA-- 39045796 Query 475854 CAGACGAGAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGTC 475910 || | |||| || || ||| | || ||||| | || |||| ||||| | | Sbjct 39045795 CAAATCTGAAAATACTCAAGATT-TGCTGCTGTTGGATGTCACTCTTCTTTCTCTTCGCA 39045737 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 ||||||| | ||| || | |||||| ||| || | |||||| | || || || Sbjct 39045736 TTGAAACTGCTGGTGGAGTCATGACTGTTCTCATCAAGCACAATACTACCATTCCTACCA 39045677 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 || | | || || | || || ||||| || || | ||| ||| || | | Sbjct 39045676 AACATACCCAAACCTTCACTACCTACTCTGACAACCAGCCTGGTGTGCTCATTCAGGTTT 39045617 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||||||||| | | || || ||||| ||| |||||| | ||| | || || Sbjct 39045616 ATGAAGGTGAGCGTGCCATGACCAAGGATAACAACCTACTTGGCAAGTTTGAACTCACAG 39045557 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || |||||||| ||| | || |||||||| |||| ||||| |||||||||||||| | Sbjct 39045556 GCATACCTCCTGCCCCCCGGGGTGTTCCTCAGATTGGGGTTACCTTTGATATTGATGCTA 39045497 Query 476151 ATGGTATTCTTAATGTTACTGCTTGTGATAA 476181 |||| ||||| | ||| ||||| ||||| Sbjct 39045496 ATGGCATTCTCAGTGTCTCTGCTGTGGATAA 39045466 >seq52188 Length=152998503 Score = 161 bits (178), Expect = 6e-34 Identities = 368/551 (67%), Gaps = 2/551 (0%) Strand=Plus/Minus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 |||| || ||||| || || | || || || ||| || || | || | || | | Sbjct 30988178 GAATGGCCATTGGCATCGACCTGGGCACCACCTACTCATGCGTGGGGGTGTTCCAGCACG 30988119 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 |||| ||||| || |||||||| ||||| || || | || || || ||||| | | Sbjct 30988118 GTAAGGTAGAGATCATTGCCAACGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCCT 30988059 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 | ||||| || |||| || ||||| ||||| || || | || | ||| ||||| Sbjct 30988058 TCACTGACACGGAACGGCTCATTGGGGATGCGGCCAAGAACCAGGTAGCAATGAATCCCC 30987999 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563 || ||| | ||||| || ||| | ||||||| | || ||| ||||| | || | Sbjct 30987998 AGAACACTGTCTTTGACGCCAAACGTCTGATTGGCAGGAAATTTAATGATCCTGTAGTGC 30987939 Query 474564 AATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAG 474623 | | |||||| || ||||||||| | || || |||| || || || || | || Sbjct 30987938 AGGCAGATATGAAACACTGGCCTTTTCAAGTAATCAATGAAGGAGGCAAGCCCAAGGTAA 30987879 Query 474624 AAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTT 474683 || || ||| || | ||| || | || || |||| ||||| ||||| Sbjct 30987878 CAGTGTCCTACAAAGGGGAGAAAAAAGCTTTCTATCCTGAGGAAATCTCTTCTATGGTAC 30987819 Query 474684 TAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTA 474742 | | || ||||| | || || ||| | | | | || || || || |||| || Sbjct 30987818 TGACAAAGATGAAGGAGACTGCTGAGGCCTTTT-TGGGCCACCCTGTCACCAATGCTGTG 30987760 Query 474743 ATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGA 474802 || ||||| ||||| ||||| ||||||||||| |||||||| || || ||||| || Sbjct 30987759 ATAACTGTGCCAGCTTATTTCAATGATTCTCAGCGTCAAGCCACCAAGGATGCAGGTGTG 30987700 Query 474803 ATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTAT 474862 ||||| ||||| ||||| || | ||||| |||||||| ||||| || || |||| ||| Sbjct 30987699 ATTGCGGGTCTCAATGTGCTAAGAATTATCAATGAACCCACAGCTGCTGCCATTGCATAT 30987640 Query 474863 GGTCTTGATAA 474873 || | ||||| Sbjct 30987639 GGCTTAGATAA 30987629 >seq113784 Length=115468741 Score = 113 bits (124), Expect = 3e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 474728 GTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACT 474787 || ||| |||| ||| | || || || || |||||||| |||||||| ||||| || || Sbjct 20285331 GTTACTAATGCTGTAGTCACAGTACCTGCCTATTTTAACGATTCTCAGCGTCAGGCTACC 20285272 Query 474788 AAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCA 474847 |||||||| |||| ||||| ||||||||||| | || || || ||||| |||||||| Sbjct 20285271 AAAGATGCTGGAACTATTGCTGGTCTTAATGTACTGCGAATCATCAATGAGCCAACAGCT 20285212 Query 474848 GCCGCACTTGCTTATGG 474864 || || | |||||||| Sbjct 20285211 GCTGCTATCGCTTATGG 20285195 Score = 96.9 bits (106), Expect = 2e-14 Identities = 121/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 |||| |||| |||||| | || || || ||| ||||| | ||||| || | || || Sbjct 20286303 TGCAGTTGGCATTGATCTTGGCACCACCTACTCCTGTGTGGGTGTTTTCCAGCACGGGAA 20286244 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| |||||||||||||| || || || || |||| || ||| ||||| | ||||| Sbjct 20286243 AGTGGAAATAATTGCCAACGATCAGGGAAACCGAACCACTCCAAGTTATGTCGCCTTTAC 20286184 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCA 474493 ||| || |||| | || || |||||||| || |||||| |||| Sbjct 20286183 TGACACCGAACGATTGATCGGTGATGCTGCAAAGAATCAAGTTGCA 20286138 Score = 93.3 bits (102), Expect = 3e-13 Identities = 256/385 (66%), Gaps = 8/385 (2%) Strand=Plus/Plus Query 475801 TGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAATCAGACGA 475860 ||| ||||| | ||||| || |||||||| ||||| || | || || | || | Sbjct 43468706 TGAGGCTGTCACTTATGGTGCAGCTGTCCAGGCAGCCATCCTTTCTGGAGA--CAAATCT 43468763 Query 475861 GAAACTAAATAATATTGTACT--TGTTG-ACGTAACTCCACTTTCATTAGGTCTTGAAAC 475917 |||| | || ||| | || ||||| | || ||||| ||||| | || ||||||| Sbjct 43468764 GAAAATGTTCAAGATT-TGCTGCTGTTGGATGTCACTCCCCTTTCTCTTGGCATTGAAAC 43468822 Query 475918 AGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAA-AT 475976 | ||| || | |||||| | | || | | |||||| | || || |||| | | Sbjct 43468823 TGCTGGTGGAGTCATGACTGTTTTCATCAAGTGCAATACTACCATTCCTACCAAACAGAC 43468882 Query 475977 CAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTTTGAAG 476036 | | | | || | || |||| ||| || || | ||| ||| || | | ||||| Sbjct 43468883 CTAGACT-TTAACTACCTATTTTGACAACCAGCCTGGTGTGCTCATTCAGGTTTATGAAG 43468941 Query 476037 GTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTC 476096 |||| || | || || | ||| ||| |||||| | ||| | || ||| || | Sbjct 43468942 GTGAGCGAGCCATGACCAAGGGTAACAACCTACTTGGCAAGTTTGAACTCACAGGCATAC 43469001 Query 476097 CTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTA 476156 |||||| ||| || ||||||| ||||| || || |||||||||||||| ||||| | Sbjct 43469002 CTCCTGTCCCCCATGGCATTCCTCAGATTGAGGTCACCTTTGATATTGATGCTAATGGCA 43469061 Query 476157 TTCTTAATGTTACTGCTTGTGATAA 476181 |||| ||||| ||||| ||||| Sbjct 43469062 TTCTCAATGTCTCTGCTGTGGATAA 43469086 Score = 87.8 bits (96), Expect = 1e-11 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 476051 ACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGA 476110 || || ||||| ||| ||| || | ||| | || ||| || |||||||| ||| | Sbjct 20283848 ACCAAGGATAACAACCTACTGGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGT 20283789 Query 476111 GGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACT 476170 || |||||||| || || || || |||||||||||||| ||||| ||||| ||||| || Sbjct 20283788 GGCGTTCCTCAGATCGAGGTCACCTTTGATATTGATGCTAATGGCATTCTCAATGTCTCT 20283729 Query 476171 GCTTGTGATAA 476181 ||| ||||| Sbjct 20283728 GCTGTGGATAA 20283718 >seq86921 Length=222198629 Score = 109 bits (120), Expect = 4e-18 Identities = 181/260 (70%), Gaps = 5/260 (2%) Strand=Plus/Minus Query 474350 ACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGAC 474409 || |||||| |||||| | ||| | || | ||||| ||||||||||||||||| Sbjct 109687194 ACCACTTACTCTTGTGTGGGTGTCTTCCAGCACCAGAAAGTGGAAATAATTGCCAATGAT 109687135 Query 474410 CAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGA 474469 | || || |||| || | | |||| | |||||||| |||| ||| ||||| Sbjct 109687134 AAGGGAAACTGAACCACCCAGTTATATCTAC--TTTACTGACACTGGTCAT---ATTGGT 109687080 Query 474470 GATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGA 474529 | |||||| || |||||| |||| || || || || |||||||| | ||| | Sbjct 109687079 GGTGCTGCAAAGAATCAAGTTGCAATAAAGCCCACCAACACAGTTTTTGATACCAAATGC 109687020 Query 474530 TTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTT 474589 ||| ||| ||| ||||||||| | ||||||||||||| || | || ||| |||| Sbjct 109687019 CTGACTGGATGTAGGTTTGATGATGCTGTTGTCCAATCTGATGTGAGACAGTGGTCTTTC 109686960 Query 474590 AAGGTGATAAATGTTGGTGG 474609 | |||| | |||| || ||| Sbjct 109686959 ATGGTGGTGAATGATGCTGG 109686940 Score = 89.7 bits (98), Expect = 3e-12 Identities = 124/172 (72%), Gaps = 4/172 (2%) Strand=Plus/Plus Query 299108 GCTTCTGAAGAAGAGATTAAAAAAGCTTATAAAAAATTAGCTATGAAATATCATCCTGAC 299167 ||||| || ||||| |||||||||||||| |||| ||| | |||| |||||| ||| Sbjct 65541995 GCTTCAGATGAAGATATTAAAAAAGCTTACCGAAAACAAGCACTCAAATTTCATCCGGAC 65542054 Query 299168 AGAAATAAAAGTCCTGAAGCGGAAGAAAAGTTTaaaaaaaTAAGTCATGCTTAT--AGTA 299225 | || ||| |||| |||| || ||||| |||||| | | | |||||| |||| Sbjct 65542055 AAGAACAAATCTCCTCAAGCAGAGGAAAAATTTAAAGAGGTCGCAGAAGCTTATGAAGTA 65542114 Query 299226 TTCTTTCAGATCCAACCAAAAAAGAAGTATATGATAAATTTGGAGAAGAAGG 299277 || | ||||| | || | |||| |||||||| | ||||| || ||||| Sbjct 65542115 TTGAGT--GATCCTAAAAAGAGAGAAATATATGATCAGTTTGGGGAGGAAGG 65542164 >seq90122 Length=803 Score = 104 bits (114), Expect = 2e-16 Identities = 180/260 (69%), Gaps = 5/260 (2%) Strand=Plus/Plus Query 474350 ACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGAC 474409 || |||||| |||||| | ||| | || | ||||| ||||||||||||||||| Sbjct 517 ACCACTTACTCTTGTGTGGGTGTCTTCCAGCACCAGAAAGTGGAAATAATTGCCAATGAT 576 Query 474410 CAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGA 474469 | || || |||| || | | |||| | |||||||| |||| ||| ||||| Sbjct 577 AAGGGAAACTGAACCACCCAGTTATATCTAC--TTTACTGACACTGGTCAT---ATTGGT 631 Query 474470 GATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGA 474529 | |||| | || |||||| |||| || || || || |||||||| | ||| | Sbjct 632 GGTGCTACAAAGAATCAAGTTGCAATAAAGCCCACCAACACAGTTTTTGATACCAAATGC 691 Query 474530 TTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTT 474589 ||| ||| ||| ||||||||| | ||||||||||||| || | || ||| |||| Sbjct 692 CTGACTGGATGTAGGTTTGATGATGCTGTTGTCCAATCTGATGTGAGACAGTGGTCTTTC 751 Query 474590 AAGGTGATAAATGTTGGTGG 474609 | |||| | |||| || ||| Sbjct 752 ATGGTGGTGAATGATGCTGG 771 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3256699465233500