Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq159875 87.8 4e-12 >seq159875 Length=83953389 Score = 87.8 bits (96), Expect = 4e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 131857 AAGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTAT 131916 |||| | || |||||||| ||| ||||| || ||||| || || |||| |||||| Sbjct 48395413 AAGAGTGGTGGCTTTTGCAGCTGTAGAAGGGATTTTCTTCTCGGGATCTTTTGCTGCTAT 48395354 Query 131917 CTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTC 131976 || ||||| ||||| | || | |||||||||||| | || |||||| || ||||| Sbjct 48395353 ATTCTGGCTGAAGAAAAGAGGTCTTATGCCTGGACTCACTTTTTCCAATGAACTCATCAG 48395294 Query 131977 GAGAGATGAAG 131987 |||||||||| Sbjct 48395293 CAGAGATGAAG 48395283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1182743283812625