Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_025428.1 Length=59601 Score E Sequences producing significant alignments: (Bits) Value seq173790 131 6e-26 >seq173790 Length=2135 Score = 131 bits (144), Expect = 6e-26 Identities = 159/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 10746 CGAACTGCGCCAGTTCATCGAGCGCGTCGAGCGCCTGGAGGTCGAGAAGAAGGACATCGC 10805 ||| ||||| ||||||||||| ||| ||||| || |||| |||||||||||| |||| Sbjct 1257 CGAGCTGCGGCAGTTCATCGAACGCTACGAGCAGCTCGAGGCCGAGAAGAAGGAGATCGG 1198 Query 10806 GGACCAGGTGAAGGAGGTCCTGGCCGAGGCCAAGGCGCGGGGCTACGACACCAAGGTCAT 10865 | |||| ||||||| | ||||||| || |||| ||||||||| | ||| || | Sbjct 1197 CGGCCAGCAGAAGGAGCTGATGGCCGAAGCGAAGGGCAGGGGCTACGCGCCGAAGATCCT 1138 Query 10866 GCGCAAGATCATCGCAGAGCGCAAGCGCAGCCGCGACGACATCAACGAGGAGGAAGCCGT 10925 | | |||| | || |||||||||| || |||||||||| ||||||||| | | Sbjct 1137 CAGGATGATCGTGGCGCTCCGCAAGCGCACCCCCGACGACATCGCCGAGGAGGAGACGCT 1078 Query 10926 CCTCGAACTGTACCGCTCGGCGCTGGGGATGTCGTGA 10962 |||||| || ||| | ||||| || ||| | ||| Sbjct 1077 CCTCGAGCTCTACAAGGCCGCGCTCGGCATGGCCTGA 1041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 189995859180750