Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Felis_20catus_20[refseq_20GCF_5F000181335.2_202014-11-07] 267,625 sequences; 2,641,342,258 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq166039 82.4 9e-11 >seq166039 Length=127282370 Score = 82.4 bits (90), Expect = 9e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 22635 ACTTCTCTTATTTCTGGATGCGCTATTTTTTCAAATATAAGTTGTGCTACTCTATCGCCC 22694 ||||| ||||||||||| || |||| | || || ||||| | || ||| ||| Sbjct 53771835 ACTTCCTCTATTTCTGGATCAAAAATCCATTCACAAATGAGCTGTGCAATTCGATCACCC 53771776 Query 22695 TTATTTACGTAAAATACATCCTTACTAAAATTAAATAACAATATACCTATATTTCCCCTG 22754 || || || | ||| || || | ||||||||||| | | ||| | |||| || Sbjct 53771775 TTTTTGACTTCAAACTTTTCTTTGCCAAAATTAAATAGTACAACACCCACATTTAGTCTA 53771716 Query 22755 TAATCTCTATCTATCACACCCGCGCCTACATCGATAAAATGATTACATGCCAATCCCGAT 22814 |||||| |||||| || || || |||||||| || || || || ||||| || || Sbjct 53771715 TAATCTTCATCTATGACGCCAGCTCCTACATCTATGAAGTGTTTCGCAGCCAAGCCAGAA 53771656 Query 22815 CTAGGAGATATTCTTCCA 22832 || |||| || ||||||| Sbjct 53771655 CTGGGAGCTACTCTTCCA 53771638 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 601162971730000