Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq3326 104 4e-17 >seq3326 Length=1112661 Score = 104 bits (114), Expect = 4e-17 Identities = 105/133 (79%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116 |||||||||||||| ||| | ||||| || |||||||| |||||||| | || ||||| Sbjct 553947 GCATTTTTTGGAGCCCAGATGAATTCCTTCATCCATGTGATTATGTATTCATACTATGGG 553888 Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174 | || || | ||| || ||| |||||||| ||||| |||||||||||||| || || | Sbjct 553887 TTAGCTGCCTTTGGCCC-ATGGATTCAGAAA-TATCTCTGGTGGAAACGTTACCTGACCA 553830 Query 52175 TAATGCAGTTGGT 52187 | ||||| |||| Sbjct 553829 TGCTGCAGCTGGT 553817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 917274757947080