Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq11610 96.9 3e-15 >seq11610 Length=252271 Score = 96.9 bits (106), Expect = 3e-15 Identities = 169/245 (69%), Gaps = 2/245 (1%) Strand=Plus/Minus Query 26753 TTTTTAGTCAAACAAA--ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACC 26810 ||||| || |||| | ||||| | ||||||||||| | ||||| ||| | ||||| Sbjct 43799 TTTTTGTTCCAACAGACAATGCAGATCTTTGTAAAAACCCTGACTGGTAAAACCATCACT 43740 Query 26811 ATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAA 26870 | || | || | | |||||||||||| | ||||| ||||| || |||||| Sbjct 43739 CTGGAGGTGGAGCCTAGTGACACCATCGAGAATGTCAAGGGGAAGATCCAAGAAAAAGAA 43680 Query 26871 GGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGA 26930 || || ||||| || || || || | || | | |||||||| || ||||||| | Sbjct 43679 GGCATCCCTCCAGACCAGCAGAGGTTGATCTTTGCAGGCAAACAGCTGGAAGATGGGCGC 43620 Query 26931 AACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990 | | | ||||| ||||| || ||||| || ||| | || |||||||| | || ||| Sbjct 43619 ACCCTGTCTGACTACAACATCCAGAAAGAGTCCACTCTGCACCTGGTCCTCCGCCTCAGA 43560 Query 26991 GGAGG 26995 || || Sbjct 43559 GGTGG 43555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475591918319440