Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq52311 93.3 5e-14 seq8207 89.7 6e-13 >seq52311 Length=1231 Score = 93.3 bits (102), Expect = 5e-14 Identities = 151/216 (70%), Gaps = 6/216 (3%) Strand=Plus/Plus Query 112296 TCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGT 112355 || |||| || || || |||||||||||| | || ||||| || ||||| ||| ||| Sbjct 1019 TCACAAATAGAAACAGGAACACCATATATGTTATATAAAGATGCATGTAATGCAAAAAGT 1078 Query 112356 AATCAAAAGAATTTGGGTGTGATCAA---GAGTTCCAACCTCTGTACAGAAATCTTGGAA 112412 |||||||| ||||| || || || ||| || | ||| ||||| | || Sbjct 1079 AATCAAAAAAATTTAGGAACAATAAAATCAAGT---AATTTATGTTGTGAAATAGTACAA 1135 Query 112413 TTTACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTAT 112472 |||||| | |||||||| | || || ||||| | |||||| | || | || || | | Sbjct 1136 TTTACAAATAAAGATGAAATAGCAGTATGTAATTTAGCATCAGTAGCATTACCAAAATTT 1195 Query 112473 GTGGATCCAGAGACAAAGACATTTGATTATGAAAAA 112508 || || ||| ||||| |||||||||| | ||||| Sbjct 1196 GTAAATGTAGAAACAAAAACATTTGATTTTAAAAAA 1231 >seq8207 Length=439286 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 ||||||| || ||||| || || || || ||||| |||||||| ||||||| | |||| Sbjct 380443 AGTCTCAGACAGAGACAGGCACCCCGTACATGCTCTACAAAGATTCCTGTAATCGGAAGA 380502 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 | || || |||| ||||| ||||| | |||||| ||||||||||| |||| | Sbjct 380503 GCAACCAGCAGAACTTGGGAACCATCAAATGCAGCAACCTGTGTACAGAAATAGTGGAGT 380562 Query 112414 TTACAGACAAAGATGAG 112430 ||| |||||||||| Sbjct 380563 ATACCAGCAAAGATGAG 380579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 616760515967440