Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq29589 181 8e-40 seq55351 179 3e-39 seq372083 159 3e-33 seq52311 156 3e-32 seq9482 145 6e-29 seq4752 127 2e-23 seq10877 105 5e-17 seq59220 100 2e-15 seq2312 100 2e-15 seq311227 98.7 8e-15 seq512960 96.9 3e-14 seq13283 96.9 3e-14 seq2656 96.9 3e-14 seq2274 96.9 3e-14 seq1512 96.9 3e-14 seq11610 86.0 5e-11 seq8567 86.0 5e-11 seq101 86.0 5e-11 >seq29589 Length=1563 Score = 181 bits (200), Expect = 8e-40 Identities = 374/547 (68%), Gaps = 16/547 (3%) Strand=Plus/Minus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 || || || ||||| |||| ||| ||||| || ||| |||| || ||| |||||| | Sbjct 862 GGAAAGGTGGAAATAATTGTCAACGATCAGGGGAACCGAACCACCCCAAGCTATGTTGCC 803 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC-CACTGGTAATCC 550164 || || | ||||| || || || |||||||| ||||| | |||| || || ||||| Sbjct 802 TTTACTAATACTGAGCAATTGGTCGGTGATGCTGCAAAGAACCAAGTTCAATG--AATCC 745 Query 550165 TACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGT 550224 ||||| || |||||||||| |||| || |||||| ||| ||| ||||| | ||| Sbjct 744 CACCAACACAGTTTTTGATGCCAAACAATTTATTGGATAAAGATTTGATGATGCTGTTGT 685 Query 550225 TCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATAT 550284 ||| | |||||||| |||||||| ||| | | |||| | |||| | |||| | | Sbjct 684 CCAGTCTGATATGAAACATTGGCCCTTCATGGTGGCGAATGATGCTGGCAGACCTAAGGT 625 Query 550285 TGAAGCTACTCATGAAGGATCTGTTAAACAATTTT------CACCAGAACAAATTTCATC 550338 | ||| || |||| | ||| | || | ||||| | | ||||| Sbjct 624 TTAAG-TAGAGTACAAGGGAGAGAGAAAGAGTTCCTGACACCTCCAGAGGAGGTGTCATC 566 Query 550339 TATGGTTTTAATGAAAATGAAACAAA-CAGCCAG-TGCTTTTGTTGGTCAAGAA-GTTAC 550395 ||||| | || || || ||| || ||| ||| | |||| |||| ||| | Sbjct 565 CATGGTCCTGGCAAAGATTAAGGAAATCA--CAGATGCCTACTTTGGG-AAGACTGTTGC 509 Query 550396 GGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGA 550455 | || || | || ||||| || || ||||||||||| || | ||| ||||| ||||| Sbjct 508 CAACGCTGTTGTCACAGTACCTGCCTACTTTAATGACTCTCAGCATCAGGCTACCAAAGA 449 Query 550456 TGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 | ||||| ||||||||| || ||||| ||| | || |||| |||||| ||||||||||| Sbjct 448 TACTGGAACTATTGCTGGTCTCAATGTACTTAGAATCATCAGTGAACCAACTGCTGCTGC 389 Query 550516 ACTTGCATATGGACTTGATAAACATAATGATCAAGAACTTAATGTACTCATCTTTGATTG 550575 |||| ||||| | ||| || | || ||| ||||| || || ||||||| Sbjct 388 TATTGCCTATGGCTTAGATGAAAAGGTTGGAGCAGAGAGAAATGTGCTGATTTTTGATTT 329 Query 550576 TGGAGGT 550582 |||||| Sbjct 328 AGGAGGT 322 >seq55351 Length=1563 Score = 179 bits (198), Expect = 3e-39 Identities = 337/486 (69%), Gaps = 16/486 (3%) Strand=Plus/Plus Query 550052 GTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACG 550111 || ||||| |||| ||| ||||| || ||| |||| || ||| |||||| | || || Sbjct 708 GTGGAAATAATTGTCAACGATCAGGGGAACCGAACCACCCCAAGCTATGTTGCCTTTACT 767 Query 550112 GAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGC-CACTGGTAATCCTACCAA 550170 | || || || || | |||||||| ||||| | |||| || || ||||| ||||| Sbjct 768 AATACCGAGCAATTGATCGGTGATGCTGCAAAGAACCAAGTTCAATG--AATCCCACCAA 825 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || |||||||||| |||| || |||||| ||| ||| ||||| | ||| ||| | Sbjct 826 CACAGTTTTTGATGCCAAACAATTTATTGGATAAAGATTTGATGATGCTGTTGTCCAGTC 885 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 |||||||| |||||||| ||| | | |||| | |||| | |||| | || ||| Sbjct 886 TGATATGAAACATTGGCCCTTCATGGTGGCGAATGATGCTGGCAGACCTAAGGTTTAAG- 944 Query 550291 TACTCATGAAGGATCTGTTAAACAATTTT------CACCAGAACAAATTTCATCTATGGT 550344 || |||| | ||| | |||| | ||||| | | ||||| ||||| Sbjct 945 TAGAGTACAAGGGAGAGAGAAAGAGTTTTTGACACCTCCAGAGGAGGTGTCATCCATGGT 1004 Query 550345 TTTAATGAAAATGAAACAAA-CAGCCAG-TGCTTTTGTTGGTCAAGAA-GTTACGGATGC 550401 | || ||||| | | || ||| ||| | |||| |||| ||||| | || Sbjct 1005 CCTGGCAAAGATGAAGGACATCA--CAGATGCCTACTTTGGG-AAGACTGTTACCAACGC 1061 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || | || ||||| || || ||||||||||| || | ||| ||||| |||||| |||| Sbjct 1062 TGTTGTCACAGTACCTGCCTACTTTAATGACTCTCAGCATCAGGCTACCAAAGATACTGG 1121 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 | ||||||||| || || || ||| | || ||||||||||| ||||||||||| |||| Sbjct 1122 AACTATTGCTGGTCTCAAGGTACTTAGAATCATCAATGAACCAACTGCTGCTGCTATTGC 1181 Query 550522 ATATGG 550527 ||||| Sbjct 1182 CTATGG 1187 >seq372083 Length=350 Score = 159 bits (176), Expect = 3e-33 Identities = 228/318 (72%), Gaps = 5/318 (2%) Strand=Plus/Plus Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 ||||| || |||||||| ||| | ||||||||||||| ||| ||||| || || || Sbjct 17 AATACAATATTTGATGCAAAAAGATTAATTGGAAGAAAATTTGATGATAAAACAGTACAA 76 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTC---TGGAAAACCTTATATT 550285 | ||||||||| |||||||| || | | |||| | | ||||||||| ||||| Sbjct 77 GAAGATATGAAACATTGGCCATTTAAGGTAACAAATGGTCCAAGTGGAAAACCAAATATT 136 Query 550286 GAAGCTACTCATGAAGGATCTGTTAAACAATTTTCAC-CAGAACAAATTTCATCTATGGT 550344 |||| || | ||||| ||| ||| ||| ||||| |||| ||||| ||||| Sbjct 137 GAAGTGACATTTCAAGGAGAAAAGAAAACATTC-CACGCAGAAGAAATATCATCAATGGT 195 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 || | ||||||||| ||| ||| | ||| | || || ||| | |||| ||| Sbjct 196 ATTGACAAAAATGAAAGAAATAGCAGAATCATTTTTAGGAAAAACAGTAAAAGATGTAGT 255 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 |||||| ||||||||||||||||| || |||||| | ||||| || |||||||| || Sbjct 256 AATAACAGTACCAGCATATTTTAACGATTCACAAAGACAAGCAACAAAAGATGCAGGTAC 315 Query 550465 TATTGCTGGACTTAATGT 550482 || || ||| | ||||| Sbjct 316 AATAGCAGGATTAAATGT 333 >seq52311 Length=1231 Score = 156 bits (172), Expect = 3e-32 Identities = 577/888 (65%), Gaps = 41/888 (5%) Strand=Plus/Minus Query 685002 GCATCTTTAAAAACAATATATGGTACTCCGGTTTCAATTTGTGTTTCCATAATTTTAAAC 685061 ||||||||| | | ||||||||| ||| ||||| ||||||| || | ||| |||| Sbjct 1062 GCATCTTTATATAACATATATGGTGTTCCTGTTTCTATTTGTGATTGTAATATTGCAAAC 1003 Query 685062 CATAAATCACGAGCAGATATTTGTTTCATAT---ATTTACCTGATTTTTCATAACTCAAA 685118 ||||| | | || | || | |||| | | ||| ||| || |||||| | Sbjct 1002 CATAATTTTTGTGCTGGTACT-GTTTTACGTCCCATT--CCTTTTTCTTCATATTGTTCA 946 Query 685119 TATGTTTCATTAAATTCAGTACC--ATATTTACCAACAATATTTGGACATTCAGATGGAC 685176 ||| || || |||||| || ||| || | | ||| | ||||||| ||||| Sbjct 945 TATAATTTATCAAATTCTTCTCCCCATACTT-CATATAATCCTCT-ACATTCATCTGGAC 888 Query 685177 ACATCAAGGACCATACTCCATCTTCTCGTACTCGCTCAATAAATATATCATTNNNNNNNN 685236 |||| || | |||| | || | || ||||| | ||||||| ||| Sbjct 887 ACATTAATGTCCATTGTTTATTTGCTTCTACTCTTTTCATAAATAAATCTGGTATCCATA 828 Query 685237 NNNCTAAAAACAAATCTCTGGCTCTTTCAGTTTCCGCTCCTGTAttttttttAAGATCGA 685296 | |||| |||||||| |||||| | ||| || ||||||| | | ||| | Sbjct 827 ATGCATAAAATAAATCTCTTGCTCTTAAATCTTCATGACCATGATTTTTTCTTAAATCTA 768 Query 685297 GGAAAAAATAAATAT--CTGCATGCCAAGGTTCAATATAAATAGCAAATGAACCAGCTCT 685354 ||| ||||||| |||||||||| ||||| | ||| || ||||||||||| ||| Sbjct 767 --AAAGTTTAAATATATCTGCATGCCATGGTTCTAAATATATTGCAAATGAACCCTTTCT 710 Query 685355 TTTGCC---TCCTTGATTGGCATACCTCGATATATTATTAAATACAGTTAATACTCGTAG 685411 ||| || |||||| | ||||| | | | |||||||| |||| | | ||| Sbjct 709 TTTTCCACCTCCTTGGTCTACATACTTTGCAGTTGAATTAAATATTTTTAACATTGGTAC 650 Query 685412 A---CCACTTGCTGTGCCTTGTGTAGAATTAATATAAGATCCATCCGCCCTAATATTTGA 685468 ||| | | | | || | || ||||||| |||||| || ||||| || Sbjct 649 TATTCCATTAGATATTCCATTAGTTCCTCTAATATATGATCCACTTGCTCTAATTTTATG 590 Query 685469 AACATTTACACCAATTCCACCAGCATATTTACTAATCATAGCACAATCTTTCCAACAATC 685528 || | || |||||||| || ||| | ||||| || | ||||| | ||| | | Sbjct 589 AATAGATAATCCAATTCCTCCTGCACACTTACTTATAAATGCACATTGTTTTAATGTTGC 530 Query 685529 ACCAATTGCTCCCAT---ATCATCTTTTATTCCTAAAAGGAAACAGCTTGATAATTGTTC 685585 | ||| || | | |||||||| || |||| | ||||| ||| | |||| Sbjct 529 AAATATTCCTTCTAATGAATCATCTTGCATATCTAATAAAAAACATGATGACATTTGTGG 470 Query 685586 ATGAGTAGTTCCAGCATTAAATAATGTTGGTGTTGCATGAGTAAAATAACCCTGTGACAA 685645 || | || |||| |||||||||||||||||||||||| |||||||| || |||| Sbjct 469 ATTTTTTGTACCAGAATTAAATAATGTTGGTGTTGCATGTGTAAAATA--TCTTTGAC-T 413 Query 685646 CATT---TCATAAGTTTCAAATATTCTGTTTAGATCATTATTACGATAATGTATAGCAAT 685702 |||| | ||| |||| |||| | ||| || ||| | | ||||||| || Sbjct 412 CATTAAATTATATGTTT---GTATTGTTTTT---TCTAAATTTCCACAATGTATTCCACA 359 Query 685703 TGCTACACGCATAAATAAATGTTGAGGTCTTTCTATGATTATTCCTTTAACtttttttAG 685762 || ||| | ||| || | |||||| ||||||||| ||| |||| || ||| || || Sbjct 358 TGATACTCTCATTAACATATGTTGTGGTCTTTCTGCTATTTTTCCATTTACTCTTAATAA 299 Query 685763 ATAACTTTGTTCAAGAGTTCTAAAACCAAA--AATCGAAAAACCATAATCTAATTGATAA 685820 ||| | ||| | ||| |||| ||||| |||| | | | ||||| || |||| Sbjct 298 ATATGATCTTTCTAATGTTTTAAATCCAAAATAATC--ATATTGAAAATCTCTTTTATAA 241 Query 685821 TTAATATGCTT-ATTGATTTCATCTCGAttttttttGACAAATTTATA 685867 | || ||||| ||| | || ||| ||||| | | ||||||||||| Sbjct 240 TCTAT-TGCTTGATTTAATTTTTCTTTATTTTCTATTACAAATTTATA 194 >seq9482 Length=156155 Score = 145 bits (160), Expect = 6e-29 Identities = 338/500 (68%), Gaps = 16/500 (3%) Strand=Plus/Plus Query 550046 GGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCT 550105 || || || || || || ||||| || || || ||| | || || || ||||| | Sbjct 145761 GGCAAGGTGGAGATCATCGCCAACGACCAGGGCAACCGCACCACCCCCAGCTATGTGGCC 145820 Query 550106 TTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCA---AGCCACTGGTAAT 550162 ||||| || || || | | | || ||||| || || | || ||||| || ||| Sbjct 145821 TTCACTGACACCGAGCGGCTCATCGGCGATGCGGCCAAGAACCAGGTAGCCA-TG--AAT 145877 Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACT 550222 || || ||| | |||||||| |||||| | ||||| |||| ||||||||| | Sbjct 145878 CCCCAGAACACTGTCTTTGATGCCAAACGTCTGATTGGCAGAAAATTTAATGATCCTGTC 145937 Query 550223 GTTCAGGCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTA- 550281 || || |||||||||| | ||||||||||||| | | || | || || || | Sbjct 145938 GTGCAATCAGATATGAAACTTTGGCCTTTCCAAGTAATCAACGAAGGAGGCAAGCCCAAG 145997 Query 550282 -TATTGAAG--CTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC 550338 || || | |||| | | ||| | ||| |||| || || |||| || || Sbjct 145998 GTAATGGTGTCCTACAAAGG--GGAAAAG--AAAGCTTTTTATCCTGAGGAAATCTCTTC 146053 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA-GTTACGG 550397 |||||| | | || ||||| | || || |||||| |||| | | | || || Sbjct 146054 TATGGTACTGACTAAGATGAAGGAGACTGCTGAGGCTTTT-TTGGGCTACACTGTCACCA 146112 Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || ||||| ||||| || || |||||||| ||||| || || || || |||| Sbjct 146113 ATGCTGTGATCACTGTGCCAGCCTACTTCAATGACTCTCAACGCCAGGCCACCAAGGATG 146172 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 | || ||| || || || ||||| || | |||||||||||||| ||||||||||| Sbjct 146173 CAGGTGTTATCGCAGGTCTCAATGTGCTAAGAATTATCAATGAACCCACTGCTGCTGCCA 146232 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| ||||| | |||||| Sbjct 146233 TTGCCTATGGCTTAGATAAA 146252 >seq4752 Length=475373 Score = 127 bits (140), Expect = 2e-23 Identities = 122/154 (79%), Gaps = 3/154 (2%) Strand=Plus/Minus Query 550375 TTTTGTTGGTCAAGAA-GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACT 550433 |||||||| | ||| ||||| |||| || | || ||||| || || |||||||||| Sbjct 443670 TTTTGTTGCT--AGACTGTTACCAATGCTGTTGTTACAGTACCTGCGTACTTTAATGACT 443613 Query 550434 CACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTA 550493 | || ||||| ||||| |||||||||||| ||||||||| || ||||| ||||| || | Sbjct 443612 CTCAGCGTCAGGCTACCAAAGATGCTGGAACTATTGCTGGTCTCAATGTACTTCGAATCA 443553 Query 550494 TCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 | ||||| || ||||||||||| |||| ||||| Sbjct 443552 TTAATGAGCCAACTGCTGCTGCTATTGCTTATGG 443519 Score = 93.3 bits (102), Expect = 3e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 549998 GGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAA 550057 || || ||| | || ||||| ||| |||||| ||||| | || | || || || ||| Sbjct 444481 GGCATTGATCTTGGCACCACCTATTCTTGTGTGGGTGTCTTCCAGCACGGAAAGGTGGAA 444422 Query 550058 ATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAAACT 550117 || |||||||||||||| || ||| |||| || ||| ||||| | || || || || Sbjct 444421 ATAATTGCCAATGATCAGGGGAACCGAACCACCCCAAGCTATGTCGCCTTTACTGATACC 444362 Query 550118 GAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACTATT 550177 |||| || | |||||||| ||||| | |||| | | ||||| ||||| || || Sbjct 444361 GAACGATTGATCGGTGATGCTGCAAAGAACCAAGTCGCAATGAATCCCACCAACACGGTT 444302 Query 550178 TTTG 550181 |||| Sbjct 444301 TTTG 444298 >seq10877 Length=337244 Score = 105 bits (116), Expect = 5e-17 Identities = 201/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 552303 GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATC 552362 ||||| |||||||| || ||||| | ||||| | ||| || | |||||| || ||| Sbjct 192423 GATGTCACTCCTCTTTCCCTTGGAATTGAAACTGCTGGTGGAGTCATGACTGTCCTCATC 192482 Query 552363 GATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAAT 552422 | | ||||| || |||||| || | | | || |||| || || || || Sbjct 192483 AAGCGCAATACCACCATTCCTACCAAGCAGACACAGACTTTCACTACCTAATCTGACAAC 192542 Query 552423 CAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAAT 552482 || ||| ||| ||||| ||| |||||| || | | || || ||||| || Sbjct 192543 CAGCCTGGTGTGCTCATTCAGGTTTATGAAGGTGAGCGTGCCATGACCAAGGATAACAAC 192602 Query 552483 CAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 | ||||| | ||| | | ||| || |||||||| || ||||| || || || ||| Sbjct 192603 CTGCTTGGCAAGTTTGAACTCACAGGCATACCTCCTGCCCCCCGTGGTGTTCCTCAGATT 192662 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAA 552598 ||||| ||||| ||||| ||||||||||| ||| | ||||| ||||| ||||| Sbjct 192663 GAAGTCACTTTTGATATTGATGCCAATGGCATTCTCAATGTCTCTGCTGTGGATAA 192718 >seq59220 Length=24887 Score = 100 bits (110), Expect = 2e-15 Identities = 150/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 15056 ACTAGATGAAGAGTGGACTCATTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 14999 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || |||||||||| ||||||||||||||||||||||| | Sbjct 14998 CCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTAGTCAGGAGGAATTCCTTCTTTATCCT 14939 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | | |||||||| | | | Sbjct 14938 GGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGAACTCGAGAGTGATGATCT 14879 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || | || || || ||||| ||||| Sbjct 14878 TCCCTGTCACGGTCTTCACAAAAATCTGCAT 14848 >seq2312 Length=925560 Score = 100 bits (110), Expect = 2e-15 Identities = 152/212 (72%), Gaps = 6/212 (3%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 16626 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 16569 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || || || || ||||||||||| | || |||||||||||| ||||| | Sbjct 16568 CCAGTTGCTTGCCAGCTAAGATCAGTCTTTGCTGGTAAGAAGGAATTCCTTCCTTATCCT 16509 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGTAACAGTT 563442 | ||||| ||||| || ||||||| | | | | || |||||||| | || Sbjct 16508 GGATTTTGGCCTTTACATTTTCTGTTGTATCCGAG-GGCTCCACCTCGAGAGTGATGGTC 16450 Query 563443 TTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || || || || || || |||||||| ||||| Sbjct 16449 TTCCCTGTCAGGGTCTTCACGAAAATCTGCAT 16418 >seq311227 Length=303 Score = 98.7 bits (108), Expect = 8e-15 Identities = 114/151 (75%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCT-AGAGTTCTTGAATCTT 563323 ||| | ||| || ||||||||||| |||||||| || ||| || |||||| ||||| Sbjct 195 TACTAAATGGAGTGTACTTTCTTTTTGGATATTGTAGTC-GCTCAGTGTTCTTCCATCTT 137 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | | ||||| || ||||| || | | ||||||||| || ||||||||||| ||||||| Sbjct 136 CTAACTGTTTACCAGCAAATATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTT 77 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 | || ||| ||| || ||| ||||| || Sbjct 76 GGATCTTTGCTTTCACATTCTCTATTGTGTC 46 >seq512960 Length=5958 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 |||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 4536 ACAAGATGAAAAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 4479 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 ||||| || || ||||| || ||||||||||| ||| ||||||||||||| |||| | Sbjct 4478 GCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAAGAGGAATTCCTTCCTTATTCT 4419 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || || ||||| | | | | |||||||| | || | Sbjct 4418 GGATCTTGGCCTTTACATTTTCTATGGTATCTGAGGGCTTGACCTCGAGAGTGATGGTCT 4359 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || ||||| || || ||||| ||||| Sbjct 4358 TCCCCGTCAGAGTCTTCACAAAAATCTGCAT 4328 >seq13283 Length=25003 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 |||||||||| || ||| |||| ||| ||||| |||| | ||| | | ||||| Sbjct 7231 ACAAGATGAAAAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTACGTCCATCTT 7174 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 ||||| || || ||||| || ||||||||||| ||| ||||||||||||| |||| | Sbjct 7173 GCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAAGAGGAATTCCTTCCTTATTCT 7114 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || || ||||| | | | | |||||||| | || | Sbjct 7113 GGATCTTGGCCTTTACATTTTCTATGGTATCTGAGGGCTTGACCTCGAGAGTGATGGTCT 7054 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || ||||| || || ||||| ||||| Sbjct 7053 TCCCCGTCAGAGTCTTCACAAAAATCTGCAT 7023 >seq2656 Length=305558 Score = 96.9 bits (106), Expect = 3e-14 Identities = 95/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||||||||| |||| | ||| | | ||||| Sbjct 78833 ACTAGATGAAGAGTGGACTCCTTTTG--AATATTGTAGTCAGACAAAGTACATCCATCTT 78776 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || ||||| || ||||||||||| ||||||||||||||||| ||||| | Sbjct 78775 CTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCCTTATCCT 78716 Query 563384 G 563384 | Sbjct 78715 G 78715 >seq2274 Length=301413 Score = 96.9 bits (106), Expect = 3e-14 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTT 563323 || |||||||| || ||| |||| ||| ||||| |||| | ||| | ||||| Sbjct 270451 ACTAGATGAAGAGTGGACTCCTTTTG--AATGTTGTAGTCAGACAAAGTATGTCCATCTT 270508 Query 563324 CAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTT 563383 | ||||| || || | ||| || ||||||||||| ||||||||||||||||||||||| | Sbjct 270509 CCAGTTGCTTGCCAGGAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTTCTTTATCCT 270568 Query 563384 GAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTT 563443 | || || ||||| || |||||||| | | | |||||||| | |||| Sbjct 270569 GGATCTTGGCCTTTACATTTTCTATTGTATCCTAGGGCTTGACCTCGAGAGTGATGGTTT 270628 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || || || || ||||| ||||| Sbjct 270629 TCTTCGTCAGGGTCTTCACAAAAATCTGCAT 270659 >seq1512 Length=676091 Score = 96.9 bits (106), Expect = 3e-14 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 ||||| ||||||| | ||||||||||||||||| ||||| | ||||| || || || Sbjct 578635 GTTACTCATGCAGTTGTTACTGTACCAGCATATTTCAATGATGCCCAACGCCAGGCAACC 578576 Query 550451 AAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACC 550503 |||||||||||| |||||||||| | ||||| | | || |||||||| || Sbjct 578575 AAAGATGCTGGAACTATTGCTGGATTGAATGTCATGAGGATCATCAATGAGCC 578523 >seq11610 Length=252271 Score = 86.0 bits (94), Expect = 5e-11 Identities = 156/224 (70%), Gaps = 6/224 (3%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAG 563311 ||||| ||||| || || || || || ||| | | ||| || ||||| |||| || | Sbjct 43561 CTGAGGCGGAGGACCAGGTGCAGAGTGGACTCTTTCTGG--ATGTTGTAGTCAGACAGGG 43618 Query 563312 TTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTC 563371 | | |||||| || ||||| || ||||| || | || ||||| || ||||| || | Sbjct 43619 TGCGCCCATCTTCCAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGC 43678 Query 563372 CTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACAT-TCG 563430 ||||||| ||||| || || || || ||| || || ||| | | | || || Sbjct 43679 CTTCTTTTTCTTGGATCTTCCCCTTGACATTCTCGATGGTGTCACTAGGC-TCCACCTCC 43737 Query 563431 AGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 ||||| | ||||||||||| || ||||| || || || ||||| Sbjct 43738 AGAGTGATGGTTTTACCAGTCAGGGTTTTTACAAAGATCTGCAT 43781 >seq8567 Length=100185 Score = 86.0 bits (94), Expect = 5e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| ||||| || || ||||| || |||||||||||||| |||||||||||||| || Sbjct 93412 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCGGGAGGAATTCCTTCGTT 93471 Query 563379 ATCTTGAATTTT 563390 |||||| || || Sbjct 93472 ATCTTGGATCTT 93483 >seq101 Length=221765 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 563266 ACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCA 563325 || |||||||| || || || ||| ||||| |||| | ||| | | |||||| Sbjct 70597 ACTAGATGAAGAGTGGGCTCCTTTTGAATGTTGTAGTCAGACAAAGTACATCCATCTTCC 70656 Query 563326 AGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGA 563385 ||||| || || ||||| || ||||||||||| ||||||||||| ||||| ||||| || Sbjct 70657 AGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATCCCTTCCTTATCCTGG 70716 Query 563386 ATTTT 563390 || || Sbjct 70717 ATCTT 70721 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4002156885811730