Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_016448.1 Length=196691 Score E Sequences producing significant alignments: (Bits) Value seq11528 113 6e-20 >seq11528 Length=527195 Score = 113 bits (124), Expect = 6e-20 Identities = 160/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 2230 ATCACAGTCAACTGTCTCAGAATCGGATCTGCGAGATCCATCTGACCTGTTCTGTCGAGG 2289 |||||| ||| |||| | ||| | | ||| |||||||| |||||||| ||||| ||| Sbjct 237643 ATCACACCCAATGGTCTGAAAATAGTACCTGTGAGATCCAGCTGACCTGCTCTGTGGAGA 237702 Query 2290 ATCCCAATGACAACATCTCCTTCAAATGGGAGGCCTTGGGCAAGACGCTTCTACGCGAGC 2349 |||| ||||| ||| |||| |||| ||| ||| | || || | ||| | || Sbjct 237703 ATCCAAATGATAACGTCTCATTCAGGTGGCAGGTCGCAGGAAAACCATTTCATAGTGAAG 237762 Query 2350 CCAACCTCACGACCTCCTGGGACCCCAGGAACAGCAGTGAGCAGAACTACACGTGCATCG 2409 | || ||| | | ||||||||||||| || | |||||| ||| |||||| ||||| | Sbjct 237763 CAAATCTCTCTATATCCTGGGACCCCAAGAGCTTCAGTGAAAAGACCTACACCTGCATAG 237822 Query 2410 CCGAAAACGCTGTGAGCAATCTCTCTTTCACGGTCTCGGCCCAGA 2454 | || || |||| |||||| | || | | | ||||| | | ||| Sbjct 237823 CTGAGAATCCTGTCAGCAATTTATCCTCCTCTGTCTCTGACAAGA 237867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625246529190920