Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq311227 111 1e-19 >seq311227 Length=303 Score = 111 bits (122), Expect = 1e-19 Identities = 155/215 (72%), Gaps = 2/215 (1%) Strand=Plus/Plus Query 25190 AAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC-GATACTATCGAGCA 25248 ||||| || ||||||||| | || || | ||||| ||| ||| | || || || ||| | Sbjct 1 AAAACTTTGACCGGAAAAACAATAACCTTGGAAGTAGAA-CCATCAGACACAATAGAGAA 59 Query 25249 AGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAGCAAAGACTCATTTA 25308 || ||| ||| || ||||| || || || || || ||||||||| | | || | Sbjct 60 TGTGAAAGCAAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAGCAACGTTTAATATT 119 Query 25309 CGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAATATTCAAAAAGAATC 25368 | || ||||| | ||||||| |||| | ||||| |||||||| ||||||||| Sbjct 120 TGCTGGTAAACAGTTAGAAGATGGAAGAACACTGAGCGACTACAATATCCAAAAAGAAAG 179 Query 25369 CACCATTCATTTAGTGTTAAGATTGAGAGGAGGAA 25403 || | |||||||| |||||| |||||||||||| Sbjct 180 TACACTCCATTTAGTATTAAGACTGAGAGGAGGAA 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 442239247388640