Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq311227 87.8 1e-12 >seq311227 Length=303 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 106275 AAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAA 106334 ||||| ||||| || || || || ||| ||||| |||||| || | | | | Sbjct 1 AAAACTTTGACCGGAAAAACAATAACCTTGGAAGTAGAACCATCAGACACAATAGAGAAT 60 Query 106335 GTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTAT 106394 |||||| ||| || || || ||||| | || ||||| ||| | | || | | Sbjct 61 GTGAAAGCAAAGATCCAAGATAAGGAAGGAATTCCACCAGATCAGCAACGTTTAATATTT 120 Query 106395 GCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCT 106454 || || ||||| ||||||||| | ||| || |||| ||||| || ||||||||| | Sbjct 121 GCTGGTAAACAGTTAGAAGATGGAAGAACACTGAGCGACTACAATATCCAAAAAGAAAGT 180 Query 106455 ACACTACATTTAGTATTGAGGTTACGAGGAGGA 106487 ||||| ||||||||||| || | |||||||| Sbjct 181 ACACTCCATTTAGTATTAAGACTGAGAGGAGGA 213 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399813292003616