Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq8207 82.4 1e-10 seq197 82.4 1e-10 >seq8207 Length=439286 Score = 82.4 bits (90), Expect = 1e-10 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 111265 CTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCC 111324 |||||| || || ||||| | ||||||||||| | |||| | || || || || Sbjct 380579 CTCATCTTTGCTGGTATACTCCACTATTTCTGTACACAGGTTGCTGCATTTGATGGTTCC 380520 Query 111325 CAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCC 111384 ||| |||| ||||| |||||| || || | ||| |||||||||||||| || || || Sbjct 380519 CAAGTTCTGCTGGTTGCTCTTCCGATTACAGGAATCTTTGTAGAGCATGTACGGGGTGCC 380460 Query 111385 CGTCTCCGTCTGTGA 111399 ||||| ||||| || Sbjct 380459 TGTCTCTGTCTGAGA 380445 >seq197 Length=217379 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 122370 ATAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCAT 122429 ||| || || || | ||||||||||||||| |||||||| || || ||| |||||||| Sbjct 123066 ATACTCGCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCCTCCAGTGAAATATTTTCCAT 123007 Query 122430 AAAGTCAAATGGATT 122444 ||||||||||||||| Sbjct 123006 AAAGTCAAATGGATT 122992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 624003355279200