Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq17057 149 1e-30 seq512960 145 2e-29 seq13283 145 2e-29 seq2656 145 2e-29 seq311227 141 2e-28 seq11610 140 8e-28 seq2312 136 9e-27 seq59220 127 5e-24 seq332959 116 9e-21 seq2274 113 1e-19 seq8567 109 1e-18 seq3131 107 5e-18 seq6593 98.7 2e-15 seq27040 93.3 1e-13 seq1348 91.5 3e-13 >seq17057 Length=148899 Score = 149 bits (164), Expect = 1e-30 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 117206 AGGACCAGGTGCAGGGTAGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 117147 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || ||||| |||||||| || Sbjct 117146 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 117087 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| |||||| ||||||||||| || ||||| || | ||||| ||| Sbjct 117086 TGGATCTTGGCCTTCACGTTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 117027 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| |||| || || | ||| | ||||||||| Sbjct 117026 TTGCCGGTCAGGGTCTTCACGAAGATTTGCATTTT 116992 >seq512960 Length=5958 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || | |||||| || ||||| | ||||| || | |||||| Sbjct 4549 ACGAAGTCTCAACACAAGATGAAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 4490 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||| || ||||| ||||| ||||| |||| ||| ||||| | ||||| || Sbjct 4489 ACGTCCATCTTGCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAAGAGGAATTCC 4430 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| | |||||||| ||| ||| ||| ||||| ||||||| | || || | Sbjct 4429 TTCCTTATTCTGGATCTTGGCCTTTACATTTTCTATGGTATCTGAGGGCTTGACCTCGAG 4370 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||||| ||| || | || | ||||| || Sbjct 4369 AGTGATGGTCTTCCCCGTCAGAGTCTTCACAAAAATCTGCATCTT 4325 >seq13283 Length=25003 Score = 145 bits (160), Expect = 2e-29 Identities = 167/225 (74%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || | |||||| || ||||| | ||||| || | |||||| Sbjct 7244 ACGAAGTCTCAACACAAGATGAAAAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 7185 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||| || ||||| ||||| ||||| |||| ||| ||||| | ||||| || Sbjct 7184 ACGTCCATCTTGCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAAGAGGAATTCC 7125 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| | |||||||| ||| ||| ||| ||||| ||||||| | || || | Sbjct 7124 TTCCTTATTCTGGATCTTGGCCTTTACATTTTCTATGGTATCTGAGGGCTTGACCTCGAG 7065 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| ||||||| ||| || | || | ||||| || Sbjct 7064 AGTGATGGTCTTCCCCGTCAGAGTCTTCACAAAAATCTGCATCTT 7020 >seq2656 Length=305558 Score = 145 bits (160), Expect = 2e-29 Identities = 151/198 (76%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 225494 GAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTC 225553 ||||||||| || || || |||||||| || ||||| | |||||| || | |||||| | Sbjct 78844 GAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATATTGTAGTCAGACAAAGTAC 78785 Query 225554 TCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTT 225613 ||||||||||| ||||| ||||| ||||| |||| ||| ||||| || ||||| |||| Sbjct 78784 ATCCATCTTCTAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCCTT 78725 Query 225614 CCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACG 225673 |||| || ||| |||| ||| ||| ||| || || || |||| || || || | | Sbjct 78724 CCTTATCCTGGGTCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGACCTCAAGAG 78665 Query 225674 TGATCGTCTTGCCCGTCA 225691 |||| ||||| ||| ||| Sbjct 78664 TGATGGTCTTCCCCATCA 78647 >seq311227 Length=303 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 ||||| || ||||||||||| |||||| ||| || ||||| |||||||||| ||| Sbjct 188 TGGAGTGTACTTTCTTTTTGGATATTGTAGTCGCTCAGTGTTCTTCCATCTTCTAACTGT 129 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || ||||| || || | ||||| || || || ||||| |||||||| |||||||||||| Sbjct 128 TTACCAGCAAATATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCTTGGATCTTT 69 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 |||||| || || |||||||| | ||| || || || || || || || || ||| Sbjct 68 GCTTTCACATTCTCTATTGTGTCTGATGGTTCTACTTCCAAGGTTATTGTTTTTCCGGTC 9 Query 225691 AAAGTTTT 225698 |||||||| Sbjct 8 AAAGTTTT 1 >seq11610 Length=252271 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| ||||| |||| ||||| || | || || | ||||||| Sbjct 43342 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 43401 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || ||||| | | || ||||| || || || || ||||||||| Sbjct 43402 TCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTCT 43461 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| || ||||| || | ||||| ||| Sbjct 43462 TGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGTC 43521 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| || || | ||| | ||||| Sbjct 43522 TTACCGGTCAAGGTCTTCACGAAGATCTGCAT 43553 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225501 CAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATC 225560 |||||| | ||| ||||| || ||||| |||| ||||| || | || || | |||||| Sbjct 43113 CAGGACCAAGTGCAGAGTAGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATC 43172 Query 225561 TTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTC 225620 ||| ||||| ||||| || ||||| | | || ||||| || || || || |||||||| Sbjct 43173 TTCCAGCTGTTTCCCCGCAAAGATCAACCTCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 43232 Query 225621 TTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGT 225680 ||||||||| ||| ||| ||||||||||| || ||||| || | ||||| || Sbjct 43233 TTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCCACCTCCAGGGTGATGGT 43292 Query 225681 CTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || ||||| || || | ||| | ||||| Sbjct 43293 CTTACCGGTCAAGGTCTTCACGAAGATCTGCAT 43325 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| |||||||| ||||| |||| ||||| || | || || | ||||||| Sbjct 43570 AGGACCAGGTGCAGAGTGGACTCTTTCTGGATGTTGTAGTCAGACAGGGTGCGCCCATCT 43629 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || || || ||||| | | || ||||| || || || ||||| || ||| Sbjct 43630 TCCAGCTGTTTGCCTGCAAAGATCAACCTCTGCTGGTCTGGAGGGATGCCTTCTTTTTCT 43689 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||||||||| | ||||| || | ||||| || Sbjct 43690 TGGATCTTCCCCTTGACATTCTCGATGGTGTCACTAGGCTCCACCTCCAGAGTGATGGTT 43749 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 || || |||| ||||||| || | |||||| Sbjct 43750 TTACCAGTCAGGGTTTTTACAAAGATCTGCATT 43782 >seq2312 Length=925560 Score = 136 bits (150), Expect = 9e-27 Identities = 165/225 (73%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || || || |||||||| || ||||| | ||||| || | |||||| Sbjct 16639 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 16580 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| |||| | ||||| || Sbjct 16579 ACGTCCATCTTCCAGTTGCTTGCCAGCTAAGATCAGTCTTTGCTGGTAAGAAGGAATTCC 16520 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||| || ||||| || ||| ||| ||| | || || |||| ||||| || | Sbjct 16519 TTCCTTATCCTGGATTTTGGCCTTTACATTTTCTGTTGTATCCGAGGGCTCCACCTCGAG 16460 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| ||||| || |||| || || | ||| | ||||| || Sbjct 16459 AGTGATGGTCTTCCCTGTCAGGGTCTTCACGAAAATCTGCATCTT 16415 >seq59220 Length=24887 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || || || |||||||| || ||||| | ||||| || | |||||| Sbjct 15069 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCATTTTGAATGTTGTAGTCAGACAAAGT 15010 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| || ||||| ||||| ||||| |||| ||| | ||| || ||||| || Sbjct 15009 ACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTAGTCAGGAGGAATTCC 14950 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || || |||||||| ||| ||| ||| || || || |||| || | || | Sbjct 14949 TTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGCTCGAACTCGAG 14890 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 ||||| |||| || |||| Sbjct 14889 AGTGATGATCTTCCCTGTCA 14870 >seq332959 Length=315 Score = 116 bits (128), Expect = 9e-21 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| || || || ||||| |||| |||||||| | | ||| | |||||| Sbjct 150 AGGACCAGGTGCAGGGTCGACTCTTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 209 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| || || || ||||| || ||||| |||||||| || Sbjct 210 TCCAGCTGCTTGCCGGCAAAGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCC 269 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||| ||||||||||| Sbjct 270 TGGATCTTGGCCTTCACGTTCTCGATGGTGTC 301 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 225581 AGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAG 225640 |||| || || || ||||| || ||||| |||||||| || |||||||| |||||| Sbjct 1 AGATGAGCCGCTGCTGGTCAGGGGGAATGCCTTCCTTATCCTGGATCTTGGCCTTCACGT 60 Query 225641 CTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTA 225700 ||||||||||| || ||||| || | |||||| |||||||| |||| || || | Sbjct 61 TCTCGATGGTGTCACTGGGCTCCACCTCCAGCGTGATGGTCTTGCCGGTCAGGGTCTTCA 120 Query 225701 TGAACACTTGCAT 225713 ||| | ||||| Sbjct 121 CGAAGATCTGCAT 133 >seq2274 Length=301413 Score = 113 bits (124), Expect = 1e-19 Identities = 145/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| || || || |||||||| || ||||| | ||||| || | |||||| Sbjct 270438 ACGAAGTCTCAACACTAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGT 270497 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 |||||||| || ||||| |||| ||||| |||| ||| ||||| || ||||| || Sbjct 270498 ATGTCCATCTTCCAGTTGCTTGCCAGGAAAGATCAGTCTTTGCTGGTCAGGAGGAATTCC 270557 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| || || |||||||| ||| ||| ||| || || || ||| | || || | Sbjct 270558 TTCTTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCTAGGGCTTGACCTCGAG 270617 Query 225672 CGTGATCGTCTTGCCCGTCA 225691 ||||| || || ||||| Sbjct 270618 AGTGATGGTTTTCTTCGTCA 270637 >seq8567 Length=100185 Score = 109 bits (120), Expect = 1e-18 Identities = 151/210 (72%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 225507 AAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAG 225566 ||||| |||||||| ||||||| ||||| || ||||| | |||||||| || Sbjct 93367 AAGGTAAAGAGTGGA--CTTTTTGCTTGTTGTAGTC----AAAGTGCATCCATCTTCCAG 93420 Query 225567 CTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGAT 225626 ||||| ||||| ||||| |||| ||| || ||||| ||||| ||||| || |||||||| Sbjct 93421 TTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCGGGAGGAATTCCTTCGTTATCTTGGAT 93480 Query 225627 CTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCC 225686 ||| ||| ||| ||| || | ||||||| || || || ||||| | ||| | Sbjct 93481 CTTGGCCTTTACATTTTCTATTGCATCTGAGGGTTTGACTTCAGGAGTGATGGACTTCCT 93540 Query 225687 CGTCAAAGTTTTTATGAACACTTGCATTTT 225716 |||| || || ||||| | ||||| || Sbjct 93541 TGTCAGGGTCTTCATGAAAATCTGCATCTT 93570 >seq3131 Length=405952 Score = 107 bits (118), Expect = 5e-18 Identities = 121/162 (75%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||||||||||| ||||| || |||||||| || ||||| | |||||| | | ||||| Sbjct 263483 ACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATATTGTAGTTAGACAAAGG 263424 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | ||||||| || ||||| |||| | ||| |||| ||| |||||||| |||| || Sbjct 263423 ACATCCATCTTTCAGTTGCTTGCCAGTAACGATCAGTCTTTGCTGGTCGGGAGGAACTCC 263364 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||| || |||||| | ||| ||| ||| || || || Sbjct 263363 TTCCTTATCCTGGATCCTGGCCTTTACATTTTCTATTGTATC 263322 >seq6593 Length=173140 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| || ||||| ||||| |||| |||||| || | | ||| | |||| || ||||| Sbjct 88391 GTGCAGGGTGGACTCTTTCTGGATATTGTAGTCTGACGGAGTGCAGCCATTCTCCAGCTG 88450 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 | | || | ||| || || || ||| |||| |||||||| || |||||||||||||| || Sbjct 88451 CATGCCTGTGAAAATCAGACGCTGTCGGTCAGGCGGAATGCCCTCCTTGTCTTGGAT-TT 88509 Query 225630 TTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCG 225688 | || || ||| || ||||||| || || || || | || || ||||||||| Sbjct 88510 TGGCTTTGACATTCTCAGTGGTGTCACTGGGCTCGACCTCAAGGGTAATGGTCTTGCCCA 88569 Query 225689 TCA 225691 ||| Sbjct 88570 TCA 88572 >seq27040 Length=31898 Score = 93.3 bits (102), Expect = 1e-13 Identities = 109/144 (76%), Gaps = 5/144 (3%) Strand=Plus/Plus Query 7735 TTGGTAAGATTCTTTGCGTTATATC-AAATTAAACCACATACTCCACCGCTTATACAATC 7793 |||||||||||||| | ||| ||| | ||| | |||| ||| | |||||| || | Sbjct 4197 TTGGTAAGATTCTTAGGGTTTCATCTATTTTATAAAACATGACCCATCACTTATATAAGC 4256 Query 7794 TTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTT-AC 7852 | ||||||||| |||| | ||| | |||||| |||| || ||||| ||||||||| || Sbjct 4257 TCCCGTCAGTTCCTTTAAATTTCATTCTTGCGAACGTAATATTCAGGCGGAATATTTAAC 4316 Query 7853 GCGTTAGCTTAATTAATATAAAAA 7876 ||||||||| |||| | ||||| Sbjct 4317 GCGTTAGCT---TTAAAACAAAAA 4337 >seq1348 Length=344280 Score = 91.5 bits (100), Expect = 3e-13 Identities = 96/126 (76%), Gaps = 4/126 (3%) Strand=Plus/Plus Query 4453 TTAATCAAAAATATTGTGAATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATA 4512 ||||||| ||| || |||| || |||||||| || || || |||||||| || || Sbjct 21481 TTAATCATAAAAAT----AATACCTGTCCATCAGTGATGGAAATGACATTTGTTGGAATG 21536 Query 4513 TAAGCAGAAACATCACCTGCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCA 4572 |||||||| |||||||| || || ||||||| || || | || || || || |||||| Sbjct 21537 TAAGCAGACACATCACCAGCCTGCGTTTCGATGACTGGAAGAGCAGTCAGGGAGCCACCA 21596 Query 4573 CCAAAA 4578 |||||| Sbjct 21597 CCAAAA 21602 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1184690211584838