Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giraffa_20camelopardalis_20tippelskirchi_20[genbank_20GCA_5F00165123 5.1_202016-05-20] 513,177 sequences; 2,705,072,464 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq3299 132 4e-26 >seq3299 Length=266545 Score = 132 bits (146), Expect = 4e-26 Identities = 124/158 (78%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 27214 GTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCG 27273 |||| ||| || |||||||| ||||| || | ||||||||||||||| ||||| || || Sbjct 77717 GTGATGTGTGCGATCATGTAGGTGAGCAGGGCGTAGCTGGCGATGTTGAAGGGCACACCC 77658 Query 27274 AGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCATCGCTTACGTAA 27333 || |||||||| ||||||| ||||| | ||| || || ||||| |||| ||||| Sbjct 77657 AGGCCCATGTCTCCCGACCGTTGGTACAACTGGCAGGACAGCTCACCATTCACCACGTAG 77598 Query 27334 AACTGACATATGGCGTGGCACGGAGGAAGAGCCATGAG 27371 ||||| || | ||||||||| || || || |||||||| Sbjct 77597 AACTGGCAGAGGGCGTGGCATGGGGGGAGGGCCATGAG 77560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 367196174606687