Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq989 91.5 3e-13
seq1858 89.7 1e-12
seq742 87.8 4e-12
>seq989
Length=699001
Score = 91.5 bits (100), Expect = 3e-13
Identities = 64/73 (88%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||||||||| ||||| ||||||| |||||||||||||||
Sbjct 407206 TGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 407147
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 407146 CCCCACGTTGGGC 407134
>seq1858
Length=138243
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Plus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 39288 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 39347
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 39348 CCCACGTTGGGC 39359
Score = 89.7 bits (98), Expect = 1e-12
Identities = 63/72 (88%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769
||||| ||||||||||||||||||| ||||| ||||||| ||||||||||||||||
Sbjct 64685 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 64626
Query 165770 CCCACGATGGGC 165781
|||||| |||||
Sbjct 64625 CCCACGTTGGGC 64614
>seq742
Length=882903
Score = 87.8 bits (96), Expect = 4e-12
Identities = 63/73 (86%), Gaps = 0/73 (0%)
Strand=Plus/Minus
Query 165709 TGCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAG 165768
|||||| ||||||||||||| ||||| ||||| ||||||| |||||||||||||||
Sbjct 6110 TGCCCGGCTAGCTCAGTCGGCAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 6051
Query 165769 CCCCACGATGGGC 165781
||||||| |||||
Sbjct 6050 CCCCACGTTGGGC 6038
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057721387435730
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |