Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq927 291 8e-74
seq138 102 8e-17
>seq927
Length=612318
Score = 291 bits (322), Expect = 8e-74
Identities = 598/884 (68%), Gaps = 5/884 (1%)
Strand=Plus/Plus
Query 16664 ACACCCATTCTTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGA 16723
|| || ||||| || || || | || | || || || |||||||| || || || ||
Sbjct 153614 ACTCCTATTCTCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 153673
Query 16724 GATATATTCTCCATGAAATCAAAAGGATTAG-TAG-CTGAAAATATTTTAGAGTACCCCA 16781
|| |||||||||||||| ||||| || || || |||||||| || | | ||||
Sbjct 153674 GAAATATTCTCCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAA--AACCCA 153731
Query 16782 GTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCA 16841
| || || | ||| || || |||||||| || | || |||||| ||| ||||
Sbjct 153732 GCTCCAGCATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCA 153791
Query 16842 TTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTT 16901
| || || || ||||| | || || || | || || ||||| || || |
Sbjct 153792 TCCCAATGAGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCAT 153851
Query 16902 CCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCA 16961
||| || ||| | ||| || ||| | ||| | || ||||| |||||||
Sbjct 153852 TGACAATTATTTCTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCA 153911
Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021
| || || || || || ||||| ||||| |||||||| ||||||||||| |||||||| |
Sbjct 153912 GGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGA 153971
Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081
|| | |||| ||||| |||||| | ||| ||||||| || || || ||||||||||
Sbjct 153972 GGCCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGA 154031
Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141
| || || || || | ||||| || | | ||||| | || || || ||||||| |
Sbjct 154032 AGATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCC 154091
Query 17142 GAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCT 17201
|||||| | |||| || || || | ||| | ||| ||| || || ||||| |
Sbjct 154092 CAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGT 154151
Query 17202 TAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACA 17261
| || | ||| |||||| || | |||||||| || |||| || || ||||
Sbjct 154152 TGAAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACA 154211
Query 17262 TTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTA 17321
| || || ||| |||| |||||||| || || || || || || || |||||||| | |
Sbjct 154212 TCTCAGAATGTTTGTT-TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAA 154270
Query 17322 TTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGG 17381
| |||| ||| | || || ||| | | ||||| || || ||||| || ||||| |
Sbjct 154271 TCTGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAG 154330
Query 17382 CGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGT 17441
| || || || | | ||| || |||||| | || || || | || | |||||
Sbjct 154331 CAAAGAAAGCAAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGT 154390
Query 17442 CCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTT 17501
|| | || ||||| | ||||||||| || | |||||||| |||| | || || |
Sbjct 154391 GCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCT 154450
Query 17502 TATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545
||||||| | ||||||||||| ||||| || || || || |||
Sbjct 154451 TATACATCTGCCAAATATCATGGTATTCGATAGGAAAGACGACA 154494
>seq138
Length=3455650
Score = 102 bits (112), Expect = 8e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045
|||| |||||||| ||||||||||| |||||||| | || |||||| |||||||||||
Sbjct 2542790 CCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2542849
Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105
| | ||| ||||||| || || || || |||||||| || || || || | ||||| |
Sbjct 2542850 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAG 2542909
Query 17106 C 17106
|
Sbjct 2542910 C 2542910
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517496620778280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |