Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq927 320 2e-82
seq138 107 2e-18
seq861 105 7e-18
>seq927
Length=612318
Score = 320 bits (354), Expect = 2e-82
Identities = 606/885 (68%), Gaps = 9/885 (1%)
Strand=Plus/Plus
Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961
|| || ||||| || || || | || | || || ||||||||||| || || || |
Sbjct 153614 ACTCCTATTCTCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 153673
Query 15962 GATATATTTTCCATAAAATCAAA-GGGATTAGTAG-CTGAAAATATCTTAGAGTACCCCA 16019
|| ||||| ||||| || ||||| ||| || || |||||||| ||| | ||||
Sbjct 153674 GAAATATTCTCCATGAAGTCAAATGGGTTTTCTACTCTGAAAAT--CTTGCTAAAACCCA 153731
Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079
| ||| | | ||| ||||| |||||||| || | || |||||| |||||| |
Sbjct 153732 GCTCCAGCATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCA 153791
Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139
| || || || ||||| | || | ||| | || | ||||||||| || || |
Sbjct 153792 TCCCAATGAGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCAT 153851
Query 16140 CTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTA 16199
||| || || || || || || ||| | || | |||||||| ||||| |
Sbjct 153852 TGACAATTATTTCTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCA 153911
Query 16200 GACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTA 16259
| || || ||||| || |||| || || |||||||| ||||||||||||||||| || |
Sbjct 153912 GGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGA 153971
Query 16260 ACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGA 16319
|| | ||| ||||| |||||| | ||||||||||| ||||| || || |||||||
Sbjct 153972 GGCCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGA 154031
Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379
| || || || || | |||||||| | | ||||| | || ||||| ||||| | |
Sbjct 154032 AGATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCC 154091
Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439
|||||| | |||| || || || | || | |||| ||| || || ||||| |
Sbjct 154092 CAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGT 154151
Query 16440 TAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACA 16499
| || | ||| |||||| ||| | |||||||| ||| | || | ||| ||||
Sbjct 154152 TGAAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACA 154211
Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559
| || || ||| |||| || ||||| || || || |||||||| || || || || | |
Sbjct 154212 TCTCAGAATGTTTGTT-TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAA 154270
Query 16560 TTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619
| || | ||| | ||| || ||| ||| ||| ||||| || || || ||||| ||||
Sbjct 154271 TCTGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAG 154330
Query 16620 CAAAAAACGC--CAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCA 16677
|||| || || || ||| | | || |||||| | || |||| | || | |||
Sbjct 154331 CAAAGAAAGCAAGAACATGGGAT--ATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCA 154388
Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737
| | | || ||||| | ||||||||| || | ||||||||| |||| | || ||
Sbjct 154389 GTGCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTT 154448
Query 16738 TTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782
|||||||| | ||||||||||| ||||| || ||||| |||||
Sbjct 154449 CTTATACATCTGCCAAATATCATGGTATTCGATAGGAAAGACGAC 154493
>seq138
Length=3455650
Score = 107 bits (118), Expect = 2e-18
Identities = 95/119 (80%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285
|| |||||||| ||||||||||||||||| || | || ||||| ||||||||||||
Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851
Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344
| ||||||||||| ||||| || || |||||||| || || || || | ||||||||
Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGC 2542910
>seq861
Length=819057
Score = 105 bits (116), Expect = 7e-18
Identities = 96/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283
|||| ||||||||||| ||||| ||||||||||| | || ||||| |||| |||||
Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645
Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343
||| ||||||||| |||||||| || ||||| ||||| | || || |||| ||||| |
Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585
Query 16344 C 16344
|
Sbjct 774584 C 774584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511366001019720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |