Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq927 320 2e-82 seq138 107 2e-18 seq861 105 7e-18 >seq927 Length=612318 Score = 320 bits (354), Expect = 2e-82 Identities = 606/885 (68%), Gaps = 9/885 (1%) Strand=Plus/Plus Query 15902 ACACCCATTCTTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAA 15961 || || ||||| || || || | || | || || ||||||||||| || || || | Sbjct 153614 ACTCCTATTCTCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGT 153673 Query 15962 GATATATTTTCCATAAAATCAAA-GGGATTAGTAG-CTGAAAATATCTTAGAGTACCCCA 16019 || ||||| ||||| || ||||| ||| || || |||||||| ||| | |||| Sbjct 153674 GAAATATTCTCCATGAAGTCAAATGGGTTTTCTACTCTGAAAAT--CTTGCTAAAACCCA 153731 Query 16020 GTTCCGTAACTAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAA 16079 | ||| | | ||| ||||| |||||||| || | || |||||| |||||| | Sbjct 153732 GCTCCAGCATAAGTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCA 153791 Query 16080 TTCCTATAAGTCGTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTT 16139 | || || || ||||| | || | ||| | || | ||||||||| || || | Sbjct 153792 TCCCAATGAGCTTCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCAT 153851 Query 16140 CTTTAATGATATCGGTGGCTCGTGTTTCAGACGGTGTATGGTTTAGGTGTTTAAACATTA 16199 ||| || || || || || || ||| | || | |||||||| ||||| | Sbjct 153852 TGACAATTATTTCTTTGACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCA 153911 Query 16200 GACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTA 16259 | || || ||||| || |||| || || |||||||| ||||||||||||||||| || | Sbjct 153912 GGCAGGCAAAGTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGA 153971 Query 16260 ACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGA 16319 || | ||| ||||| |||||| | ||||||||||| ||||| || || ||||||| Sbjct 153972 GGCCAGACATCAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGA 154031 Query 16320 ATATACCCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTAC 16379 | || || || || | |||||||| | | ||||| | || ||||| ||||| | | Sbjct 154032 AGATTCCTTCCACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCC 154091 Query 16380 GAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCT 16439 |||||| | |||| || || || | || | |||| ||| || || ||||| | Sbjct 154092 CAATCCAACGCAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGT 154151 Query 16440 TAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACA 16499 | || | ||| |||||| ||| | |||||||| ||| | || | ||| |||| Sbjct 154152 TGAAGAGACACTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACA 154211 Query 16500 TTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTA 16559 | || || ||| |||| || ||||| || || || |||||||| || || || || | | Sbjct 154212 TCTCAGAATGTTTGTT-TCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAA 154270 Query 16560 TTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619 | || | ||| | ||| || ||| ||| ||| ||||| || || || ||||| |||| Sbjct 154271 TCTGAATTTCTTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAG 154330 Query 16620 CAAAAAACGC--CAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCA 16677 |||| || || || ||| | | || |||||| | || |||| | || | ||| Sbjct 154331 CAAAGAAAGCAAGAACATGGGAT--ATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCA 154388 Query 16678 ATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTT 16737 | | | || ||||| | ||||||||| || | ||||||||| |||| | || || Sbjct 154389 GTGCTGGAGGTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTT 154448 Query 16738 TTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGAC 16782 |||||||| | ||||||||||| ||||| || ||||| ||||| Sbjct 154449 CTTATACATCTGCCAAATATCATGGTATTCGATAGGAAAGACGAC 154493 >seq138 Length=3455650 Score = 107 bits (118), Expect = 2e-18 Identities = 95/119 (80%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 || |||||||| ||||||||||||||||| || | || ||||| |||||||||||| Sbjct 2542792 TCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCTTG 2542851 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 | ||||||||||| ||||| || || |||||||| || || || || | |||||||| Sbjct 2542852 AGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAGC 2542910 >seq861 Length=819057 Score = 105 bits (116), Expect = 7e-18 Identities = 96/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16224 CTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCT 16283 |||| ||||||||||| ||||| ||||||||||| | || ||||| |||| ||||| Sbjct 774704 CTTCATCTCTGCTGATGAGTTCATTGGAAAAAGTGAGTCCAGGCATAAGACCTCTTTTCT 774645 Query 16284 TTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAG 16343 ||| ||||||||| |||||||| || ||||| ||||| | || || |||| ||||| | Sbjct 774644 TTAGCCAGAATATAGCAGCAAAAGATCCCGAGAAGAAAACTCCTTCTACAGCAGCAAAGG 774585 Query 16344 C 16344 | Sbjct 774584 C 774584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511366001019720