Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001348.1
Length=124884
Score E
Sequences producing significant alignments: (Bits) Value
seq612 96.9 3e-15
>seq612
Length=937308
Score = 96.9 bits (106), Expect = 3e-15
Identities = 372/576 (65%), Gaps = 14/576 (2%)
Strand=Plus/Minus
Query 18789 GGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTTTGGAGCGGAATATAAAGAC 18848
||||| | ||||| |||| ||||| |||||||| | ||| ||| | ||||| |||||
Sbjct 700889 GGGGATGTAGGCCCAGTTTATGGCTTTCAGTGGAGGCTTTTGGGA-CAGAATACAAAGAA 700831
Query 18849 TGTCAATCAAACTATTTACAGCAAGGAATCGATCAGCTGCAAACTGTTATAGATACAATT 18908
| ||| | ||| | |||||| | || || ||||||| || | || || ||
Sbjct 700830 ATGGATTCAGATTATGCAGGTCAAGGAGTAGACCAACTGCAAAAGGTGACTGACACTATC 700771
Query 18909 AAAACAAACCCAGAAAGCCGACGAATGATTATATCGTCTTGGAATCCAAAGGATATCCCC 18968
||||| ||||| || | || |||| | | | |||| |||||||| ||| |
Sbjct 700770 AAAACCAACCCTGATGACAGAGGAATCACCCTGTGCGCTTGAAATCCAAAAGATCTTTTT 700711
Query 18969 TTAATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTA 19028
| |||| ||| |||| || || | | || ||||| ||||| | ||| |||| |
Sbjct 700710 CTCATGGAACTTCCTCTGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACAGTGAGCTG 700651
Query 19029 TCCTGCCAAGTATACC----AGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACAT 19084
| || ||| | || |||| || | || ||||||| | || || ||||||||
Sbjct 700650 TTGTG--AAGAAACCCTTCTAGAGGTCAGCCGACGTGGGCCTATGTGTGCCATTCAACAT 700593
Query 19085 TGCTGGATATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAAC-CGGAG 19143
||| | || | || || |||||| | || || | | | || |||| | || | ||
Sbjct 700592 TGCCAGCTACTCCCTGCTCACCTACGTGGTTGCACTTATCAC-GGACCTGAAGCAAGGTA 700534
Query 19144 ATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATCATATAGATGCTTTAAAAG 19203
| || | || || || | |||||||| |||||| ||||| || || | | |||
Sbjct 700533 ACTTGGTACACACTTTGAGAGATGCACACATTTACCTGAATTGCATTGAGCCACTGAAAA 700474
Query 19204 TGCAGCTAGCTCGATCCCCAAAACCTTTTCCTTGCCTTAAAATTATTCGAAATGTAACAG 19263
|||||| | || |||| | || | || ||||| || |||| | ||
Sbjct 700473 TGCAGCGTCATGGAGAGCCAACGTCGTTCC---AGCTCAAAATCCTTTGAAAACT-TGAG 700418
Query 19264 ATATAA-ACGACTTTAAATGGGACGATTTTCAGCTTGATGGATATAATCCACAccccccc 19322
| | || | ||||| || || || |||||| |||| || || ||||| |||| |
Sbjct 700417 ACAAAAGATGACTTCAAGGCTGAAGACTTTCAGATTGAAGGGTACAATCCTCACCTGACT 700358
Query 19323 cTAAAAATGGAAATGGCTCTTTAATGGATTTTTAAA 19358
| ||| || |||||||| ||| | | |||||||
Sbjct 700357 ATTAAACTGAAAATGGCTGTTTTAAGTGCTTTTAAA 700322
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399467137141695
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |