Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001623.1
Length=133894
Score E
Sequences producing significant alignments: (Bits) Value
seq808 98.7 9e-16
seq331 91.5 1e-13
seq265 86.0 5e-12
seq376 84.2 2e-11
>seq808
Length=762264
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021
||||| || ||||| ||||| | || || || ||||| ||| ||| |||||| ||
Sbjct 447812 ATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCA 447871
Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081
|| || | | || | ||| || || ||||| ||||| | || |||||
Sbjct 447872 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 447931
Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT-TCCAAAACTATGGCCGATTACAA 29140
|||||||| |||||||| ||||| |||||||||||| || | || || | || |||||
Sbjct 447932 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCT-TGTCTGACTACAA 447990
Query 29141 TATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
||||| ||||| || |||||||| | |||||
Sbjct 447991 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 448023
>seq331
Length=2147541
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| ||||| || ||| | ||||| || || || || ||||| ||| | | | ||||||
Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | ||| || || ||||| ||||| | || |||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| ||||||| |||||||| ||||| |||||||||||| ||| || | || |||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
|| ||||| ||||| || |||||||| | |||||
Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 851453
>seq265
Length=2261556
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018
|| ||||| || ||| | ||||| | || || || ||||| ||| ||| ||||||
Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972
Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078
| || || | | || | ||| || || ||||| ||||| | || |||
Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032
Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138
|| ||||||| |||||||| ||||| |||||||||||| ||| || | || |||
Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092
Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
|| ||||| ||||| || |||||||| | |||||
Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 841127
>seq376
Length=1527771
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114
||||| ||||| | || ||||| |||||||| |||||| | ||||| |||||||||
Sbjct 1196376 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAA 1196435
Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173
||| | ||| || | || ||||| ||||| ||||| || |||||||| | |||||
Sbjct 1196436 GATGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 1196494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 428296476768005
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |