Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq19 255 7e-63
seq827 143 3e-29
seq612 91.5 2e-13
>seq19
Length=7530758
Score = 255 bits (282), Expect = 7e-63
Identities = 570/846 (67%), Gaps = 10/846 (1%)
Strand=Plus/Minus
Query 176359 CCGCC-CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 176417
||||| |||||| || |||||| |||| | |||||||| | | |||||| |
Sbjct 3690558 CCGCCACTGTATGCCCTGGTGTTTGGAGTTGGTCTCCTGGGCAATGTGCTGGTGGTGGTG 3690499
Query 176418 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 176477
|| ||| || ||||| | | | | || ||||| | ||| | || |||||
Sbjct 3690498 ATCCTCAAAAAATACAGGCGCCTGCGCATTATGACCAACATCTACCTGCTCAATTTGGCG 3690439
Query 176478 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 176537
|| ||||||||||| ||||| | || | || || ||||| |||||||| | || |
Sbjct 3690438 ATTTCTGACTTGCTGTTTCTAGTCACCCTCCCCTTCTGGATTCACTATATCAGG-TGGA- 3690381
Query 176538 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 176597
|||| ||| ||||| | | ||||||| ||||| ||| ||| ||||||
Sbjct 3690380 -ATGAGTGGGTGTTTGGCCATCGCATGTGTAAGTTGCTCTCGGGGCTGTATTACATAGGC 3690322
Query 176598 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 176657
||||||| || |||||| |||||||||||| || | |||||||| || || |||||
Sbjct 3690321 TTGTACAGTGAGATCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATTGTC 3690262
Query 176658 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 176717
| ||||| || || || | || || ||| ||| || | | | |||| |
Sbjct 3690261 CACGCTGTGTTCGCGCTGCGGGCCCGGACTGTCACCATTGGGATCATAAGCAGTGTCTTC 3690202
Query 176718 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 176777
|||||| ||||||||| || ||||||| |||||| |||| ||| | ||||||
Sbjct 3690201 ACCTGGGCCCTGGCAGGGCTGGCTGCCCTCCCCGAATTTATCTTCCATAGGTTCCAAGAG 3690142
Query 176778 GACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAG-ATGTCTACAAATGTTTGGAG 176836
|| || ||||| || ||| || |||||| ||| | | | ||||
Sbjct 3690141 GATTCTGAACAGGTTCTCTGCAGTCCACTTTATCCAGAGGATGAAGA-AGACACCTGGAA 3690083
Query 176837 GCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGC 176896
||| | | | || | ||| | | || ||||| || |||||||||||||||||||
Sbjct 3690082 GCGTTTCTATGCTGTGAGAATGAATGTCTTGGGTCTCGTTCTGCCTCTGCTCATTATGGC 3690023
Query 176897 TGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAA 176956
||||||||| | ||| || | || ||| | || ||||||| | || ||||| ||
Sbjct 3690022 TGTCTGCTATGCCGGAATCATTAAAACGCTGGTCAGATGCCCCAGTAGAAAAAAGTATAA 3689963
Query 176957 GGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAA 177016
|||||| ||||||| |||||||||||||||| || ||| |||| ||| ||| |||||
Sbjct 3689962 GGCCATTCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGGGACCTTACAA 3689903
Query 177017 CATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTG 177074
| | |||||||| || || | | ||| | | |||||| | ||| | |||| |
Sbjct 3689902 CCTGGTTCTCCTTCTCTCCGCTTATCAAACGA-TCTTCTTTGAGGCTG-ACTGTGAGCGG 3689845
Query 177075 AGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGC 177134
|||| | ||||| |||| ||||| | || | | |||||||| ||||| ||
Sbjct 3689844 AGCAAACAGCTGGACGTGGCCATGCTGGTGACGGAGGTGATCGCCTACACGCACTGCTGT 3689785
Query 177135 ATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTC 177194
|||| || ||||||||||| || || || |||| ||| | ||||| |||||||
Sbjct 3689784 GTCAATCCTGTGATCTACGCCTTTGTTGGAGAGAGGTTCCGGGAGCACCTCCACCACTTT 3689725
Query 177195 TTCCAC 177200
||||||
Sbjct 3689724 TTCCAC 3689719
Score = 255 bits (282), Expect = 7e-63
Identities = 570/846 (67%), Gaps = 10/846 (1%)
Strand=Plus/Minus
Query 9473 CCGCC-CTGTATCTGCTTGTGTTTCTCTTTGGGTTGTTGGGCAATATCTTAGTGGTGATT 9531
||||| |||||| || |||||| |||| | |||||||| | | |||||| |
Sbjct 3690558 CCGCCACTGTATGCCCTGGTGTTTGGAGTTGGTCTCCTGGGCAATGTGCTGGTGGTGGTG 3690499
Query 9532 ATTGTCATAAGATACATGAAGATCAAAAACCTCACTAACATGTTACTGTTAAACTTGGCA 9591
|| ||| || ||||| | | | | || ||||| | ||| | || |||||
Sbjct 3690498 ATCCTCAAAAAATACAGGCGCCTGCGCATTATGACCAACATCTACCTGCTCAATTTGGCG 3690439
Query 9592 ATATCTGACTTGCTATTTCTTTTAACTTTGCCATTTTGGATGCACTATATTGGAATGTAT 9651
|| ||||||||||| ||||| | || | || || ||||| |||||||| | || |
Sbjct 3690438 ATTTCTGACTTGCTGTTTCTAGTCACCCTCCCCTTCTGGATTCACTATATCAGG-TGGA- 3690381
Query 9652 CATGATTGGACTTTTGGTATTTCCCTGTGTAAACTGCTCAGGGGTGTGTGTTACATGTCA 9711
|||| ||| ||||| | | ||||||| ||||| ||| ||| ||||||
Sbjct 3690380 -ATGAGTGGGTGTTTGGCCATCGCATGTGTAAGTTGCTCTCGGGGCTGTATTACATAGGC 3690322
Query 9712 CTGTACAGCCAGGTCTTTTGCATCATCCTGCTAACAGTAGACAGGTATCTAGCTGTTGTC 9771
||||||| || |||||| |||||||||||| || | |||||||| || || |||||
Sbjct 3690321 TTGTACAGTGAGATCTTTTTCATCATCCTGCTGACCATCGACAGGTACCTGGCCATTGTC 3690262
Query 9772 TATGCTGTAACTGCTTTGAGGTTTAGAACAGTAACCTGTGGCATAGTTACCTGTGTATGT 9831
| ||||| || || || | || || ||| ||| || | | | |||| |
Sbjct 3690261 CACGCTGTGTTCGCGCTGCGGGCCCGGACTGTCACCATTGGGATCATAAGCAGTGTCTTC 3690202
Query 9832 ACCTGGTTTCTGGCAGGGTTGTTGTCCCTCCCTGAATTTTTCTTTCATGGACACCAAGAT 9891
|||||| ||||||||| || ||||||| |||||| |||| ||| | ||||||
Sbjct 3690201 ACCTGGGCCCTGGCAGGGCTGGCTGCCCTCCCCGAATTTATCTTCCATAGGTTCCAAGAG 3690142
Query 9892 GACAATGGTAGGGTTCAGTGTGATCCTTACTACCCAGAG-ATGTCTACAAATGTTTGGAG 9950
|| || ||||| || ||| || |||||| ||| | | | ||||
Sbjct 3690141 GATTCTGAACAGGTTCTCTGCAGTCCACTTTATCCAGAGGATGAAGA-AGACACCTGGAA 3690083
Query 9951 GCGCGCCCACGTTGCAAAGGTGATTATGTTAAGTCTCATTTTGCCTCTGCTCATTATGGC 10010
||| | | | || | ||| | | || ||||| || |||||||||||||||||||
Sbjct 3690082 GCGTTTCTATGCTGTGAGAATGAATGTCTTGGGTCTCGTTCTGCCTCTGCTCATTATGGC 3690023
Query 10011 TGTCTGCTACTATGTAATTATCAGAAGACTGTTGAGGCGCCCCAGCAAGAAGAAGTACAA 10070
||||||||| | ||| || | || ||| | || ||||||| | || ||||| ||
Sbjct 3690022 TGTCTGCTATGCCGGAATCATTAAAACGCTGGTCAGATGCCCCAGTAGAAAAAAGTATAA 3689963
Query 10071 GGCCATCAGGCTCATCTTTGTCATCATGGTGGCCTATTTTGTTTTTTGGACACCCTACAA 10130
|||||| ||||||| |||||||||||||||| || ||| |||| ||| ||| |||||
Sbjct 3689962 GGCCATTCGGCTCATTTTTGTCATCATGGTGGTCTTTTTCATTTTCTGGGGACCTTACAA 3689903
Query 10131 CATTGTTCTCCTACTGTCTACCTTTCACGCAACCCTTCTT--AACCTGCAGTGTGCATTG 10188
| | |||||||| || || | | ||| | | |||||| | ||| | |||| |
Sbjct 3689902 CCTGGTTCTCCTTCTCTCCGCTTATCAAACGA-TCTTCTTTGAGGCTG-ACTGTGAGCGG 3689845
Query 10189 AGCAGTAACTTGGACATGGCTCTGCTGATAACAAAAACAGTAGCCTACACACACTGTTGC 10248
|||| | ||||| |||| ||||| | || | | |||||||| ||||| ||
Sbjct 3689844 AGCAAACAGCTGGACGTGGCCATGCTGGTGACGGAGGTGATCGCCTACACGCACTGCTGT 3689785
Query 10249 ATCAACCCAGTGATCTACGCGTTCGTGGGGGAGAAGTTTAGAAGACACCTGTACCACTTC 10308
|||| || ||||||||||| || || || |||| ||| | ||||| |||||||
Sbjct 3689784 GTCAATCCTGTGATCTACGCCTTTGTTGGAGAGAGGTTCCGGGAGCACCTCCACCACTTT 3689725
Query 10309 TTCCAC 10314
||||||
Sbjct 3689724 TTCCAC 3689719
>seq827
Length=831450
Score = 143 bits (158), Expect = 3e-29
Identities = 128/160 (80%), Gaps = 3/160 (2%)
Strand=Plus/Plus
Query 138082 CAGCGCCTCAGCCTCACCCTGAGGGTTTTGAGCTTTTCCCCCAGGGAGTTCACTTTATCC 138141
||||||| |||| | |||||| || || ||||||||||| ||||||||||| | |||
Sbjct 170661 CAGCGCCGGAGCCGGAGCCTGAGTGTCTTCAGCTTTTCCCCGAGGGAGTTCACGTGCTCC 170720
Query 138142 TTTTCCTGGTCGGTGCTGTGGTTCTCGGCCTGGGGCATCACCTCCTCCAGGTAAAACTGG 138201
|| ||| | || ||| |||| |||| |||||||||||| |||| ||||||||||
Sbjct 170721 TTGAT---GTCTGGGCCCTGGCTCTCAGCCTTGGGCATCACCTCTTCCAAGTAAAACTGG 170777
Query 138202 ATCATCTCAGACAGGGCCTGGCAGCCCAGGTAACCCTTAA 138241
|||||||| |||| ||| ||||| ||||||||||||| ||
Sbjct 170778 ATCATCTCCGACAAGGCTTGGCAACCCAGGTAACCCTAAA 170817
Score = 105 bits (116), Expect = 8e-18
Identities = 81/96 (84%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 137921 CTCAGTTTTTCATCTTTGTGGTCATGTAGGCCTCTATGTAGTTAATGAAGATGTCAAACT 137980
|| ||||||||||| | | |||| |||| | ||||||||||| |||||||| || ||||
Sbjct 168464 CTTAGTTTTTCATCCTCATTGTCAGGTAGTCTTCTATGTAGTTGATGAAGATATCGAACT 168523
Query 137981 CGCTCATGGCCTTGTAGACCCCTTTTTCCTGGAGCT 138016
| |||||||| |||||||||||||| || |||||||
Sbjct 168524 CACTCATGGCTTTGTAGACCCCTTTGTCTTGGAGCT 168559
>seq612
Length=937308
Score = 91.5 bits (100), Expect = 2e-13
Identities = 231/348 (66%), Gaps = 5/348 (1%)
Strand=Plus/Plus
Query 145566 GTGGGGGTGGTAGCCCTCCAGCGCAAAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCAC 145625
||| || | ||| || || | | |||||| || ||| ||||||||||| | ||| |
Sbjct 700364 GTGAGGATTGTACCCTTCAATCTGAAAGTCTTCAGCCTTGAAGTCATCTTTTGTCTCAAG 700423
Query 145626 CCGCCTCAGGATCCTGAGCCTGGGAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAG 145685
| ||||| ||||| |||| | || |||| | | |||| | |||||
Sbjct 700424 TTTTCAAAGGATTTTGAGCT--GGAACGACGTTGGCTCTCCATGAC-GCTGCATTTTCAG 700480
Query 145686 GGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGG 145745
||||| | | || ||||| | ||| || || | || ||| | |||| || |
Sbjct 700481 TGGCTCAATGCAATTCAGGTAAATGTGTGCATCTCTCAAAGTGTGTACCAAGTTACCTTG 700540
Query 145746 CTCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAA 145805
|| ||| |||||| | || |||| |||||| ||||||||||||||||| ||||||||
Sbjct 700541 CTTCAGGTCCGTGATAAGTGCAACCACGTAGGTGAGCAGGGAGTAGCTGGCAATGTTGAA 700600
Query 145806 GGGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCT--GGCAGGAGAGCTCCCCG 145863
||||| | || |||| ||| | || | || | | | | || | ||||| | |
Sbjct 700601 TGGCACACATAGGCCCACGTCGGCTGACCTCTAGAAGGGTTTCTTCACAACAGCTCACTG 700660
Query 145864 CCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911
| |||||||||||||||| ||| ||||| | || || |||||
Sbjct 700661 TTCACCACGTAGAACTGGCAAAGGGCATGGCACAGAGGAAGTTCCATG 700708
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590020956606840
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