Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_001731.1 Length=190289 Score E Sequences producing significant alignments: (Bits) Value seq19 268 1e-66 seq457 109 7e-19 >seq19 Length=7530758 Score = 268 bits (296), Expect = 1e-66 Identities = 262/338 (78%), Gaps = 0/338 (0%) Strand=Plus/Minus Query 83057 AGCAGGGCCTCGATGTCGGGCTCCACGGCCAGGGTCTGGCAGCGGTGGCTGTACCTGCGC 83116 |||||||| |||||||| ||||| | | | ||| | ||||| |||||||||||||| Sbjct 1455059 AGCAGGGCTTCGATGTCAGGCTCGATATCGATGGTGGGAAAGCGGCGGCTGTACCTGCGC 1455000 Query 83117 ACGGGCGTGCCGTCAGCACCCACCAAGAACTTCTCGAAGTTCCAGGCCACGTCGTTGCGG 83176 || ||| ||| || | ||||||| |||||| |||||||||||||| | |||||||||| Sbjct 1454999 ACAGGCACGCCATCCGGGCCCACCAGGAACTTTTCGAAGTTCCAGGCAATGTCGTTGCGG 1454940 Query 83177 CACACTGGAGACCAGGCAATGAGCTGGGGGTCGCTCACGAGCGTGCTCATGTCGTCGCTA 83236 || || |||||||||| |||| || ||| ||| ||| ||||| | ||||||| || Sbjct 1454939 CATACCGGAGACCAGGTGATGAACTTGGGATCGGTCATGAGCGCAGTGGTGTCGTCACTG 1454880 Query 83237 GGCGCCGGCAGGGCCTCTCGTAGGAAGGCGAAGAGCGGATGTGCCCTTGCACCGTTGACC 83296 ||||| ||||| | ||| || | ||| ||||| || || || ||| ||||| || ||| Sbjct 1454879 GGCGCGGGCAGAGTCTCCCGCAAGAAAGCGAAAAGAGGGTGCGCCTGAGCACCATTCACC 1454820 Query 83297 TCGCACTTCTCGAAGAGCATAAAGTTCGGCTCGAAGCCGTTCCCAGGACGGACGTGCTTC 83356 |||||||||||||||||| | ||||| |||||||| ||| ||||| ||||||| ||| Sbjct 1454819 TCGCACTTCTCGAAGAGCGTGAAGTTAGGCTCGAACCCGCCGCCAGGTCGGACGTACTTG 1454760 Query 83357 AGGGAAGGCAAGATCTCGGCATTCTGGGCGTTTTCCTG 83394 ||| || || ||| || | |||| |||||| ||||| Sbjct 1454759 AGGCAATTCAGGATTTCTTCGTTCTTGGCGTTCTCCTG 1454722 Score = 196 bits (216), Expect = 6e-45 Identities = 170/211 (81%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 83391 CCTGGTGACCGAACTGGTTACACGGGAACCCAAGCACTACCAGCCCCCGAGCTCCTAGGC 83450 |||| || ||||||||||| |||||||| || ||||||||||| ||||| | || |||| Sbjct 1454495 CCTGATGTCCGAACTGGTTGCACGGGAAACCCAGCACTACCAGGCCCCGGGGCCCCAGGC 1454436 Query 83451 GCCGCTGCAGCTCGTTCATCTGAGTGTACTCCCGGACCGTGCTACCTCAGAGGGACGCTA 83510 ||||||||| |||||||||||| ||||| ||||||||||| | |||||||| || || | Sbjct 1454435 GCCGCTGCAACTCGTTCATCTGGGTGTAGTCCCGGACCGTTGTGCCTCAGAGAGAGGCCA 1454376 Query 83511 CGTTCTCGATGAGCAAGACCCGGCCCCGTAAGAAGCCTAAGCTCACAGGTTCTCCTCCGG 83570 | ||||| ||||||| ||| |||||| | | || | | | ||||||| || || |||| Sbjct 1454375 CATTCTCAATGAGCAGCACCTTGCCCCGCAGGGAGTCCAGGTTCACAGGCTCCCCGCCGG 1454316 Query 83571 TAATCGGGCGTGCTGAGAAGGCGTACACAGA 83601 | |||||| || |||||||| |||||||| Sbjct 1454315 CCAGCGGGCGCGCGGAGAAGGCATACACAGA 1454285 >seq457 Length=1675377 Score = 109 bits (120), Expect = 7e-19 Identities = 203/288 (70%), Gaps = 9/288 (3%) Strand=Plus/Plus Query 50410 GCACCTGCGCAAGATGTACG-GCGCAAGCAGGTCTATCTACAACTTCGCTGTGCGTATGC 50468 ||| ||||||| || |||| | ||| || ||||||| ||||||||| ||| ||| Sbjct 96309 GCAGCTGCGCAGCATCTACGAGAGCA-GCCTGTCTATCGGCAACTTCGCCTCGCGCCTGC 96367 Query 50469 TCGTGTACATGTTTCCAGAGCTCTTTACTGCGGAGAACCTGCACACGCACTTCAACTGCT 50528 | ||| || | || || |||||||| || |||||||||| || ||| | ||||||| Sbjct 96368 TGGTGCACCTCTTCCCCGAGCTCTTCACCCATGAGAACCTGCGCAAGCAGTACAACTGCA 96427 Query 50529 ACGGCTCCATGGGCAAGC-GCAGGCTCGACCCGCTACGCCTGC-GCTTGCTCCGGCACTA 50586 ||||||| |||| ||| |||| || || ||| ||| | |||| || | ||||| Sbjct 96428 GCGGCTCCCTGGGTAAGAAGCAG-CTGGATCCGTCCCGCATCAAGCTTATTC-GCCACTA 96485 Query 50587 TGTGCAGTTGCTGCACCCGGCGGCGCGCAACGAGCGCGTGTGGATCACAAAGTTCCTGGC 50646 |||||| |||| |||| ||| ||||| ||||| |||| |||| ||| Sbjct 96486 CGTGCAGCTGCTCTACCCCCGGGCCAAGAACGACCGCGTCTGGACGCTGGAGTTTGTGGG 96545 Query 50647 GTGCCTGGACGAGCGCTGCCGGCGCCGCTGCGCACGGA-CACAGGCGC 50693 ||||||| |||||||||||||| | |||||| || |||||| Sbjct 96546 CAAATTGGACGAACGCTGCCGGCGCCG--GGACACGGAGCAGAGGCGC 96591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 608739184992840