Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq808 98.7 8e-16
seq331 91.5 1e-13
seq265 86.0 5e-12
seq376 84.2 2e-11
>seq808
Length=762264
Score = 98.7 bits (108), Expect = 8e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094
||||| || ||||| ||||| | || || || ||||| ||| ||| |||||| ||
Sbjct 447812 ATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCA 447871
Query 25095 GAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 25154
|| || | | || | ||| || || ||||| ||||| | || |||||
Sbjct 447872 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 447931
Query 25155 CAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTC-CAAAACTATGGCCGATTACAA 25213
|||||||| |||||||| ||||| ||| |||||||| || | || || | || |||||
Sbjct 447932 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCT-TGTCTGACTACAA 447990
Query 25214 TATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||||||||||| || |||||||| | |||||
Sbjct 447991 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 448023
>seq331
Length=2147541
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| ||||| || ||| | ||||| || || || || ||||| ||| | | | ||||||
Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | || | ||| || || ||||| ||||| | || |||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| ||||||| |||||||| ||||| ||| |||||||| ||| || | || |||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||| || |||||||| | |||||
Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 851453
>seq265
Length=2261556
Score = 86.0 bits (94), Expect = 5e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| ||||| || ||| | ||||| | || || || ||||| ||| ||| ||||||
Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | || | ||| || || ||||| ||||| | || |||
Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| ||||||| |||||||| ||||| ||| |||||||| ||| || | || |||
Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
|| ||||||||||| || |||||||| | |||||
Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 841127
>seq376
Length=1527771
Score = 84.2 bits (92), Expect = 2e-11
Identities = 90/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 25128 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAA 25187
||||| ||||| | || ||||| |||||||| |||||| | ||||| ||| |||||
Sbjct 1196376 GATAAGGAAGGAATTCCTCCTGATCAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAA 1196435
Query 25188 GATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTCACATGGTGTT 25246
||| | ||| || | || ||||| ||||||||||| || |||||||| | |||||
Sbjct 1196436 GATGGACATACTTTGTCTGACTACAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTT 1196494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410758895137394
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |