Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 118 9e-22
seq717 113 4e-20
seq298 98.7 9e-16
seq73 98.7 9e-16
seq265 96.9 3e-15
seq56 96.9 3e-15
seq45 96.9 3e-15
seq331 87.8 2e-12
seq920 86.0 5e-12
seq553 84.2 2e-11
seq125 82.4 7e-11
>seq5307
Length=1324
Score = 118 bits (130), Expect = 9e-22
Identities = 152/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || || || || | |||||| ||||||
Sbjct 938 CACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTC 879
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | || ||||||||||| || || || |||||||||||||||
Sbjct 878 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 819
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| ||| | | || | ||||| || ||||||||| | || | || ||
Sbjct 818 GATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTT 759
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || ||||| ||||||||
Sbjct 758 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 113 bits (124), Expect = 4e-20
Identities = 151/210 (72%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || || | || | |||||| ||||||
Sbjct 563460 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTC 563519
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || || | || ||| ||||||| || || || |||||||||||||||
Sbjct 563520 CAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 563579
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| ||| || | || | ||||| || ||||||||| | || | || ||
Sbjct 563580 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTT 563639
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || ||||| ||||||||
Sbjct 563640 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq298
Length=2265018
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/210 (71%), Gaps = 3/210 (1%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || || || || | |||||| ||||||
Sbjct 584616 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG--AGAGTGCGGCCATCCTC 584673
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| || | | || ||||||||||| || || || ||||||||||||||| |
Sbjct 584674 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT-T 584732
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||| ||| || | || | ||||| || ||||||||| || | || ||
Sbjct 584733 GGATTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGGTCTT 584792
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || || ||||| |||||||
Sbjct 584793 GCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq73
Length=4601553
Score = 98.7 bits (108), Expect = 9e-16
Identities = 149/210 (71%), Gaps = 4/210 (2%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || ||||| ||| | || | | ||||||
Sbjct 4090083 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAG--GCTGAGAGAGTCC--ATCCTC 4090028
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648
|||||||| ||| | | || ||| || |||| || || || |||||||||||||||
Sbjct 4090027 CAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 4089968
Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708
||||| ||| || | | ||||| || ||||||||||| || | || ||
Sbjct 4089967 GATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTT 4089908
Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||| ||||| || | ||||| ||||||||
Sbjct 4089907 GCCCGTCAGGGTCTACACAAAGATCTGCAT 4089878
>seq265
Length=2261556
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582
||||||||| | || | || ||||| |||||||||||||| || || ||| ||
Sbjct 841131 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 841072
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
||| || || || || ||||| |||| | | |||||||| ||||| || || |||||
Sbjct 841071 ATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 841012
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
|| || || || || | ||| | || |||| | || ||||||| ||| |
Sbjct 841011 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 840952
Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||||| || ||||| || |||||||||||
Sbjct 840951 GGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916
>seq56
Length=5443799
Score = 96.9 bits (106), Expect = 3e-15
Identities = 150/213 (70%), Gaps = 10/213 (5%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| | || || || || | | || |||||||
Sbjct 2722509 CACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTC--TGAGAGA-----TATCCTC 2722561
Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT---ATGCCCTCCTTGTC 118645
|||||||| || || | || ||| ||||||| | | |||| ||||||||||||||
Sbjct 2722562 CAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2722621
Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705
| ||||| |||||| | || | |||||| || ||| ||||| | || | ||
Sbjct 2722622 TTGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGT 2722681
Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
||||| |||||||| || ||||| ||| ||||
Sbjct 2722682 CTTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714
>seq45
Length=5545317
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/211 (71%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588
||||||||| | || |||||||| || || || || || | |||| | ||||||
Sbjct 1737689 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTC 1737748
Query 118589 GAGCTGTTTTCCAG-CGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647
||||||| || | | || |||| |||||| || || || |||||||||||||||
Sbjct 1737749 CAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTT 1737808
Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707
||||| ||| || | || |||||| | || |||||||| || | || |
Sbjct 1737809 GGATTTTAGCTTTGACATTCTCAGTGGTGTCAGG---CTTGACCTCGAGTGTGATGGTCT 1737865
Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| ||||| || || ||||||||||||||
Sbjct 1737866 TGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq331
Length=2147541
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570
||| || || | ||||||||| | || | || ||||| |||||||||||||| ||
Sbjct 851469 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 851410
Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630
|| ||| || ||| || || || || ||||| |||| | | |||||||| |||||
Sbjct 851409 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGG 851350
Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690
|| || ||||| || || || || || | ||| | || |||| | || |
Sbjct 851349 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGC 851290
Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || ||| | || || ||||| | ||||| || |||||||||||
Sbjct 851289 CTTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242
>seq920
Length=534542
Score = 86.0 bits (94), Expect = 5e-12
Identities = 160/230 (70%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 118511 ACCTCCGCGTAATCTCAACACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
||| || || | ||||||| ||||| || | || |||| |||||||||||||| ||
Sbjct 150003 ACCACCACGAAGTCTCAAC-CCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAG 150061
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||| || ||| || || || || ||||| |||| || | |||||||| ||||
Sbjct 150062 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 150121
Query 118630 GTATGCCCTCCTT-GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688
| || || ||||| |||| || || || || | ||| || |||| | ||
Sbjct 150122 GAATTCCTTCCTTATTCTG-GATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCA 150180
Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || ||| | || || || || || ||||| || |||||||||||
Sbjct 150181 ACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 150230
>seq553
Length=1528452
Score = 84.2 bits (92), Expect = 2e-11
Identities = 147/212 (69%), Gaps = 8/212 (4%)
Strand=Plus/Minus
Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCG--TATCC 118586
||||||||| | ||| |||||| || | || || || | | || |||| |||||
Sbjct 585363 CACCAAGTGCAGTGTGGACTCT----GAGTATTATAGTC--TGAGAGAGCGCAGCTATCC 585310
Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646
| |||||||| || || | || |||| |||| | || | || |||||||||||||||
Sbjct 585309 TGCAGCTGTTTGCCCGCAAAAATCAGACACTGCCGGTCAGTCGGGATGCCCTCCTTGTCT 585250
Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706
||||| ||| || | || | ||||| || || |||||||| || | ||
Sbjct 585249 TGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTTGACCTCGAGTGTGATGGTC 585190
Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|| || |||| || || ||||| ||||||||
Sbjct 585189 TTACCTATCAGGGTCTTCACAAAGATCTGCAT 585158
>seq125
Length=3779757
Score = 82.4 bits (90), Expect = 7e-11
Identities = 113/157 (72%), Gaps = 1/157 (1%)
Strand=Plus/Minus
Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642
|||||| |||||| | || | | || ||| |||||||||| || || |||||||||||
Sbjct 1449573 ATCCTCCAGCTGTGTGCCCACAAAAATCAGATGCTGCTGATCAGGTGGGATGCCCTCCTT 1449514
Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702
|||| ||||| ||| || | || || ||||| || ||| ||||| || || |
Sbjct 1449513 GTCTTGGATTTTAGCTTTGACATTCTCAACAGTGTCACTGGTCTTGACCTTGAGCGTGAT 1449454
Query 118703 CGTTTTGCCGGTCAGAGT-TTTTACAAAAATCTGCAT 118738
|| ||||| || || ||| ||||| ||||||||
Sbjct 1449453 GGTCTTGCCCCTCTACGTCTTTCACAAAGATCTGCAT 1449417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433790369791132
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |