Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq5307 118 9e-22 seq717 113 4e-20 seq298 98.7 9e-16 seq73 98.7 9e-16 seq265 96.9 3e-15 seq56 96.9 3e-15 seq45 96.9 3e-15 seq331 87.8 2e-12 seq920 86.0 5e-12 seq553 84.2 2e-11 seq125 82.4 7e-11 >seq5307 Length=1324 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || || || || | |||||| |||||| Sbjct 938 CACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGCGGCCATCCTC 879 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || | || ||||||||||| || || || ||||||||||||||| Sbjct 878 CAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 819 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| | | || | ||||| || ||||||||| | || | || || Sbjct 818 GATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTT 759 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| |||||||| Sbjct 758 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq717 Length=839118 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || || | || | |||||| |||||| Sbjct 563460 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTC 563519 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || || | || ||| ||||||| || || || ||||||||||||||| Sbjct 563520 CAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 563579 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | ||||| || ||||||||| | || | || || Sbjct 563580 GATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTT 563639 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| |||||||| Sbjct 563640 GCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq298 Length=2265018 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || || || || | |||||| |||||| Sbjct 584616 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG--AGAGTGCGGCCATCCTC 584673 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| || | | || ||||||||||| || || || ||||||||||||||| | Sbjct 584674 CAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCT-T 584732 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||| ||| || | || | ||||| || ||||||||| || | || || Sbjct 584733 GGATTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAGGTGTGATGGTCTT 584792 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || || ||||| ||||||| Sbjct 584793 GCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq73 Length=4601553 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || ||||| ||| | || | | |||||| Sbjct 4090083 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAG--GCTGAGAGAGTCC--ATCCTC 4090028 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGT 118648 |||||||| ||| | | || ||| || |||| || || || ||||||||||||||| Sbjct 4090027 CAGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 4089968 Query 118649 AATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | | ||||| || ||||||||||| || | || || Sbjct 4089967 GATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTT 4089908 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| || | ||||| |||||||| Sbjct 4089907 GCCCGTCAGGGTCTACACAAAGATCTGCAT 4089878 >seq265 Length=2261556 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 118523 TCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT 118582 ||||||||| | || | || ||||| |||||||||||||| || || ||| || Sbjct 841131 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 841072 Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 ||| || || || || ||||| |||| | | |||||||| ||||| || || ||||| Sbjct 841071 ATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 841012 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 || || || || || | ||| | || |||| | || ||||||| ||| | Sbjct 841011 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 840952 Query 118703 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||||| || ||||| || ||||||||||| Sbjct 840951 GGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq56 Length=5443799 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 10/213 (5%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| | || || || || | | || ||||||| Sbjct 2722509 CACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTC--TGAGAGA-----TATCCTC 2722561 Query 118589 GAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGT---ATGCCCTCCTTGTC 118645 |||||||| || || | || ||| ||||||| | | |||| |||||||||||||| Sbjct 2722562 CAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2722621 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||||| |||||| | || | |||||| || ||| ||||| | || | || Sbjct 2722622 TTGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGT 2722681 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||||| |||||||| || ||||| ||| |||| Sbjct 2722682 CTTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714 >seq45 Length=5545317 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTC 118588 ||||||||| | || |||||||| || || || || || | |||| | |||||| Sbjct 1737689 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTC 1737748 Query 118589 GAGCTGTTTTCCAG-CGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 ||||||| || | | || |||| |||||| || || || ||||||||||||||| Sbjct 1737749 CAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTT 1737808 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||||| ||| || | || |||||| | || |||||||| || | || | Sbjct 1737809 GGATTTTAGCTTTGACATTCTCAGTGGTGTCAGG---CTTGACCTCGAGTGTGATGGTCT 1737865 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| ||||| || || |||||||||||||| Sbjct 1737866 TGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896 >seq331 Length=2147541 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 118511 ACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCT 118570 ||| || || | ||||||||| | || | || ||||| |||||||||||||| || Sbjct 851469 ACCACCACGAAGTCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGA 851410 Query 118571 CATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGG 118630 || ||| || ||| || || || || ||||| |||| | | |||||||| ||||| Sbjct 851409 CAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGG 851350 Query 118631 TATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGAC 118690 || || ||||| || || || || || | ||| | || |||| | || | Sbjct 851349 AATTCCTTCCTTATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGC 851290 Query 118691 CTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || ||| | || || ||||| | ||||| || ||||||||||| Sbjct 851289 CTTGAGGGTGATGGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242 >seq920 Length=534542 Score = 86.0 bits (94), Expect = 5e-12 Identities = 160/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 118511 ACCTCCGCGTAATCTCAACACCAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||| || || | ||||||| ||||| || | || |||| |||||||||||||| || Sbjct 150003 ACCACCACGAAGTCTCAAC-CCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAG 150061 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||| || ||| || || || || ||||| |||| || | |||||||| |||| Sbjct 150062 ACAAAGTACGTCCATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAG 150121 Query 118630 GTATGCCCTCCTT-GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCG 118688 | || || ||||| |||| || || || || | ||| || |||| | || Sbjct 150122 GAATTCCTTCCTTATTCTG-GATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCA 150180 Query 118689 ACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || ||| | || || || || || ||||| || ||||||||||| Sbjct 150181 ACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 150230 >seq553 Length=1528452 Score = 84.2 bits (92), Expect = 2e-11 Identities = 147/212 (69%), Gaps = 8/212 (4%) Strand=Plus/Minus Query 118529 CACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCG--TATCC 118586 ||||||||| | ||| |||||| || | || || || | | || |||| ||||| Sbjct 585363 CACCAAGTGCAGTGTGGACTCT----GAGTATTATAGTC--TGAGAGAGCGCAGCTATCC 585310 Query 118587 TCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCT 118646 | |||||||| || || | || |||| |||| | || | || ||||||||||||||| Sbjct 585309 TGCAGCTGTTTGCCCGCAAAAATCAGACACTGCCGGTCAGTCGGGATGCCCTCCTTGTCT 585250 Query 118647 GTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTT 118706 ||||| ||| || | || | ||||| || || |||||||| || | || Sbjct 585249 TGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTTGACCTCGAGTGTGATGGTC 585190 Query 118707 TTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || |||| || || ||||| |||||||| Sbjct 585189 TTACCTATCAGGGTCTTCACAAAGATCTGCAT 585158 >seq125 Length=3779757 Score = 82.4 bits (90), Expect = 7e-11 Identities = 113/157 (72%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 118583 ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTT 118642 |||||| |||||| | || | | || ||| |||||||||| || || ||||||||||| Sbjct 1449573 ATCCTCCAGCTGTGTGCCCACAAAAATCAGATGCTGCTGATCAGGTGGGATGCCCTCCTT 1449514 Query 118643 GTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCAC 118702 |||| ||||| ||| || | || || ||||| || ||| ||||| || || | Sbjct 1449513 GTCTTGGATTTTAGCTTTGACATTCTCAACAGTGTCACTGGTCTTGACCTTGAGCGTGAT 1449454 Query 118703 CGTTTTGCCGGTCAGAGT-TTTTACAAAAATCTGCAT 118738 || ||||| || || ||| ||||| |||||||| Sbjct 1449453 GGTCTTGCCCCTCTACGTCTTTCACAAAGATCTGCAT 1449417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433790369791132