Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_002188.1
Length=288539
Score E
Sequences producing significant alignments: (Bits) Value
seq170 100 5e-16
>seq170
Length=2938728
Score = 100 bits (110), Expect = 5e-16
Identities = 101/128 (79%), Gaps = 4/128 (3%)
Strand=Plus/Minus
Query 52057 GCATTTTTTGGAGCTCAGCTAAATTCTTTTATCCATGTTATTATGTACACTTATTATGGT 52116
|||||||||||||| ||| | |||||||| |||||||| ||||||||| | || || ||
Sbjct 964480 GCATTTTTTGGAGCCCAGATGAATTCTTTCATCCATGTGATTATGTACTCCTACTACGGG 964421
Query 52117 ATGGCCGCTTGTGGTCCTATG--TTCAGAAAGTATCTATGGTGGAAACGTTATCTTACTA 52174
|| | || |||||| ||| ||||||| |||||| ||||||||||| || || || |
Sbjct 964420 TTGACTGCGCTTGGTCC-ATGGATTCAGAA-GTATCTTTGGTGGAAACGGTACCTGACCA 964363
Query 52175 TAATGCAG 52182
| |||||
Sbjct 964362 TGTTGCAG 964355
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 52204 ATAGGACATACTGCTATGTCCATTTACATAGATTGCCCGTTTCCAAAATGGATACAGTGG 52263
|| ||||| || || |||| |||||| |||||||| || ||||||||||| || |||
Sbjct 961571 ATTGGACACACAGCGCTGTCTCTTTACACCGATTGCCCCTTCCCAAAATGGATGCACTGG 961512
Query 52264 TCAGTTATTATCTATTCTATTAGTTTCATATTACTGTTTGGTAACTTCTATTTTAGAACA 52323
| | ||| |||| | || || |||||| | || ||| |||||||||| || | |||
Sbjct 961511 GCTCTCATTGCCTATGCCATCAGCTTCATAGTTCTCTTTCTTAACTTCTATATTCGGACA 961452
Query 52324 TACAA 52328
|||||
Sbjct 961451 TACAA 961447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 923109430962840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |