Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_002665.1
Length=108873
Score E
Sequences producing significant alignments: (Bits) Value
seq277 1772 0.0
seq125 143 2e-29
>seq277
Length=2549824
Score = 1772 bits (1964), Expect = 0.0
Identities = 1378/1645 (84%), Gaps = 35/1645 (2%)
Strand=Plus/Plus
Query 107136 AGGGTCTTAGGCAGGACTTGACTGAGGATATTTGTCTATAGAAGACATCTATCTTTACCA 107195
||| || |||||||| ||||| ||||||||||||||| |||||||||| ||| ||| |||
Sbjct 1986376 AGGCTCCTAGGCAGGTCTTGAATGAGGATATTTGTCTCTAGAAGACATATATTTTTGCCA 1986435
Query 107196 TCACTCTGGAGTTGAACTTGATGTTC--------------TGGATTAGTTTGTAATTAAA 107241
||||| |||||||||||||||||||| || ||||||||||||| ||
Sbjct 1986436 TCACTTTGGAGTTGAACTTGATGTTCCTGGGAAAACATTTAGGGTTAGTTTGTAATTGAA 1986495
Query 107242 GGCATTTTGTTCTGTCCAAGGATCTCCTCCTCCACCTTGCCTGTGCCCAAACTCTCCTGA 107301
||||||||||||||| ||||||| | || ||| |||| ||||||||||||||| ||||
Sbjct 1986496 GGCATTTTGTTCTGTTCAAGGATTCCATCGTCCTCCTTCCCTGTGCCCAAACTCGACTGA 1986555
Query 107302 TCTCCCATCCCATGAAGATGGCTGGGTGGAAGAAGAAGCTTTGCCGGGGACATCATCTGT 107361
||| |||| |||||||||| | ||||||||||||| || |||||| ||| | ||||
Sbjct 1986556 TCTTCCATTACATGAAGATGATTTGGTGGAAGAAGAAACTCTGCCGGCAGCATTACCTGT 1986615
Query 107362 GGGCCCTGGGCTGCTATATGCTGCTGGCCGTTGTTTCTCTGAGACTTTCCCTCAGGTTTA 107421
|||| |||||||||||| | ||||| ||| ||||| |||||| |||||| ||||| ||
Sbjct 1986616 GGGCTCTGGGCTGCTATTTCCTGCTAGCCATTGTTGCTCTGAAACTTTCTCTCAGATTGC 1986675
Query 107422 AATGTGATGTAGATTCCTTGGATCTGGAGTCCAGGGACTTCCAGAGTCAGCACTGTAGGG 107481
||||||| | |||||| |||||||||||||||||||||| | || ||||||||||||
Sbjct 1986676 AATGTGACTTTGATTCCCTGGATCTGGAGTCCAGGGACTTTCGAAGCAAGCACTGTAGGG 1986735
Query 107482 ACATGTTGTACAATAGCCTGAAGCTGCCAGCAAAGAGATCCATCAACTGTTCTGGGATCA 107541
|||| |||||| | ||||||| |||||||||| ||| ||| ||||||||| | ||||
Sbjct 1986736 ACATCTTGTACGAGTCCCTGAAGTTGCCAGCAAAAAGACTCATAAACTGTTCTCGAATCA 1986795
Query 107542 CGCGAGGGGACCAGGAAGCAGTGGTCCAGGCCCTCCTAGACAACCTGGAAGTGAAGAAAA 107601
| ||||||||||||||||||||| |||| ||||| ||||||||||| |||||||| |
Sbjct 1986796 CCCGAGGGGACCAGGAAGCAGTGACTGAGGCTCTCCTGGACAACCTGGATGTGAAGAAGA 1986855
Query 107602 AGCGGTCGCCTCTCACTGGCACCTATTACCTCAACATAACCAGAGACTGTGAGCGCTTCA 107661
||||| |||| |||| | |||| | ||||||||||| |||||||||||||||| ||| |
Sbjct 1986856 AGCGGAAGCCTTTCACAGACACCGACTACCTCAACATGACCAGAGACTGTGAGCACTTTA 1986915
Query 107662 AGGCCCAAAGGAAGTTCATACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTG 107721
|||||||||||||||||||||||| ||||| || ||||| ||| | |||||||| ||||
Sbjct 1986916 AGGCCCAAAGGAAGTTCATACAGTATCCACTCAGCAAAGAGGAGGTGGACTTCCCTATTG 1986975
Query 107722 CCTACTCGATGGTGGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGT 107781
| | ||| |||||||| ||||||||||| |||||||| ||| |||||||| |||| ||||
Sbjct 1986976 CATTCTCTATGGTGGTACATGAGAAGATCGAAAACTTCGAAAGGCTGCTGAGAGCTGTGT 1987035
Query 107782 ATGCCCCTCAGAACATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAG 107841
||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||
Sbjct 1987036 ATGCCCCTCAGAACATATATTGTGTCCACGTGGATGAGAAGTCCCCAGAAACTTTCAAAG 1987095
Query 107842 AGGCGGTCAAGGCCATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCC 107901
|||| ||| |||| |||||||| |||||||||||||||||||||||||||||||||| |
Sbjct 1987096 AGGCAGTCCAGGCAATTATTTCATGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGCTC 1987155
Query 107902 CGGTGGTTTATGCCTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGC 107961
||||||||||||||| ||||| || ||||| |||||||||||||||||||| ||||| |
Sbjct 1987156 GGGTGGTTTATGCCTCTTGGTCTAGGGTGCAGGCTGACCTGAACTGTATGGAGGACTTAC 1987215
Query 107962 TCCAGAGCTCAGTGCCATGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAA 108021
|||||||||||||||| ||||| ||||| |||||||||||||| |||||||| || ||||
Sbjct 1987216 TCCAGAGCTCAGTGCCGTGGAAATACTTCCTGAATACATGCGGAACAGACTTTCCTATAA 1987275
Query 108022 AGACCAATGCCGAGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGT 108081
||||||||||||||||||||||| |||||||||||||||| || ||||| ||||||||||
Sbjct 1987276 AGACCAATGCCGAGATGGTCCTGACCCTCAAGATGTTGAAAGGGAAGAATAGTATGGAGT 1987335
Query 108082 CTGAGGTACCTTCTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACA 108141
| ||| || ||| |||||||| | |||||||||||| | |||||||||||||||||
Sbjct 1987336 CAGAGACAC---CTGGGTCCAAAATATCTCGCTGGAAATATCACTATGAGGTGACAGACA 1987392
Query 108142 CACTGTACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAG 108201
|| | | | |||| |||||||||||||||||| ||| |||||||||| ||||||| ||
Sbjct 1987393 CAGTATCCATAACCAACAAGATGAAGGACCCTCCGCCTTATAATTTACCTATGTTCATAG 1987452
Query 108202 GGAATGCCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAAT 108261
||||||||||| | ||||| ||||||| |||||||||||| |||||||| ||||| ||||
Sbjct 1987453 GGAATGCCTATATCGTGGCTTCTCGAGGCTTTGTCCAACAGGTCTTAGAGAACCCCAAAT 1987512
Query 108262 CCCAAAGACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCA 108321
| | | |||| | ||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 1987513 CACGACAACTGATCGAATGGGCAAAAGACACCTATAGCCCCGATGAACACCTCTGGGCCA 1987572
Query 108322 CCCTTCAGCGTGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCT 108381
||||||| |||||||| |||||||||||||| ||||| ||||||||||| |||| ||
Sbjct 1987573 CCCTTCATCGTGCTCCATGGATGCCTGGCTCCATTCCTTACCACCCCAAGTTCCACACCT 1987632
Query 108382 CAGACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCA 108441
| |||||| ||||||| |||||||| ||||||||| |||||||||| ||||| |||||||
Sbjct 1987633 CGGACATGGCTGCCATTGCCAGGCTGGTCAAGTGGGAGTACCACGAAGGAGACGTCAGCA 1987692
Query 108442 TGGGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGG 108501
||||||| ||||||| ||| |||||||||| ||| | | || ||||||||||| |||
Sbjct 1987693 TGGGGGCACCTTATGGACCTTGCTCTGGAACCCACCAGCGGAGTATCTGCATTTATGGGA 1987752
Query 108502 CCGGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGA 108561
| ||||||||| ||||||| || || | || |||||| ||||| |||||||||||||| |
Sbjct 1987753 CTGGGGACCTGCACTGGATGCTTCAAAGCCCTCACCTGTTGGCCAACAAGTTTGACCCCA 1987812
Query 108562 GGGTGGATGATAACGTCCTGCAGTGCTTAGAAGAGTACCTACGTCATAAGGCCATCTATG 108621
|||||||||||| || || |||||||||||||| ||| ||||| |||||||||||||||
Sbjct 1987813 AGGTGGATGATAATGTTCTTCAGTGCTTAGAAGAATACTTACGTTATAAGGCCATCTATG 1987872
Query 108622 GGACTGAACTTTGA----------------GCTGCACTGTGGGCCAGGGAC-TGTGCCAA 108664
|||||||||| ||| ||| ||||||| |||| || ||||| ||
Sbjct 1987873 GGACTGAACTCTGACATACATTATGAGAGGATTGCCCTGTGGGGCAGGAACATGTGCAAA 1987932
Query 108665 CATGCCCAGGGCGTACTGGTAC-TGTGTGGGGTGGGGGACGAGGGCTGTGGAATCCATGG 108723
||||||||| || |||| || || ||| |||| ||| |||||| |||| || ||||
Sbjct 1987933 CATGCCCAGATTGTGCTGGGACAACTGAGGGTTGGGAGACCAGGGCTCTGGAGTCTATGG 1987992
Query 108724 CATCCCCCAGGGTCAGAGGGCTGCT 108748
||||||||||||| || ||||||||
Sbjct 1987993 CATCCCCCAGGGTAAGGGGGCTGCT 1988017
>seq125
Length=3779757
Score = 143 bits (158), Expect = 2e-29
Identities = 575/894 (64%), Gaps = 45/894 (5%)
Strand=Plus/Plus
Query 107688 CCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGTGGTCCATGAGAAG 107747
|| || |||||||||||| | | || || || || || || || ||||| ||| | |||
Sbjct 17717 CCCCTTAGTAAAGAAGAGGCAAAGTTTCCAATAGCATATTCCATAGTGGTTCATCACAAG 17776
Query 107748 ATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAACATATACTGTGTC 107807
||||||| ||||| |||| ||||| ||| | ||| |||||||| | || || |
Sbjct 17777 ATTGAAATGTTTGACAGGCTCCTGCGGGCCATCTATATGCCTCAGAATTTCTATTGCATT 17836
Query 107808 CACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGCCATTATTTCCTGC 107867
|| ||||| || || || | || | || || | | |||| |||||
Sbjct 17837 CATGTGGACAAAAAATCAGAGGATTCCTTTTTGGCTGCAGTGATTGGCATTGCATCCTGT 17896
Query 107868 TTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGCCTCCTGGTCCAGA 107927
||| |||||||| |||||||| || ||| | ||||| ||||| || ||| |
Sbjct 17897 TTCAGTAATGTCTTTGTGGCCAGTCAGCTGGAGACCGTGGTGTATGCATCGTGGAGTCGG 17956
Query 107928 GTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGTGCCA--TGGAAGT 107985
|| || ||||| || ||||||||| | ||| | || |||| | ||||| |||||||
Sbjct 17957 GTTCAGGCTGATCTCAACTGTATGCAGGACCT-CTACAGAA-TGAGTGCAGATTGGAAGT 18014
Query 107986 ACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCGAGATGGTCCTGG 108045
|||| | ||| ||||| | || || || || || ||||| || || ||| |
Sbjct 18015 ACTTGATAAATCTTTGCGGTATGGATTTTCCTATTAAAACCAACCTGGAAATTGTCAGGA 18074
Query 108046 CCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTA---CCTTCTGAGTCCa 108102
|||||| | | ||| | |||| | | || ||||| | || || | |
Sbjct 18075 AACTCAAGTCACTAATGGGAGAAAACAATCTCGAAACTGAGAAAATGCCATCCAAT---A 18131
Query 108103 aaaaaaaTCGCTGGAAA--------TACCGCT----ATG---AGGTGACAGACACACTGT 108147
||||| | | |||||| ||| | | ||| || ||||| ||||| |
Sbjct 18132 AAAAAGAAAGGTGGAAAAAACATTATACAGTTGTTAATGGAAAGCTGACAAACACAGGG- 18190
Query 108148 ACCCTACCAGCAAGATGAAGGACCCTCCCCCTGATAATTTACCCATGTTCACAGGGAATG 108207
|| ||| | || ||||| | ||| | ||| |||| |||| | ||
Sbjct 18191 -----ACTGACAAACTACAG---CCTCCTCTTGAAAC---ACCTCTGTTTTCAGGCAGTG 18239
Query 108208 CCTATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAA 108267
|||||||||||| | | | | ||| | | || |||| || ||| |||||
Sbjct 18240 CCTATTTTGTGGTCAGTAGGAAATATGTGGAGTACGTGCTAGAGAATGAAAAAATCCAAA 18299
Query 108268 GACTGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTC 108327
| | || |||| |||||||| || ||||| || || | ||||||||||| |||
Sbjct 18300 AGTTTATGGAGTGGGCAAAAGACACATACAGCCCAGATGAGTATCTCTGGGCCACTATTC 18359
Query 108328 AGCGTGCTCCGTGGA-TGCCTGGCTC--TGTTCCTA-GCCACCCCAAGTATCACATCTCA 108383
|| | | ||| || | | || || || ||| |||| |||| |||||| |||| ||
Sbjct 18360 AGAG-GATCCCTGAAGTCCCAGGATCACTGTCCCTAAGCCAT---AAGTATGACATGTCC 18415
Query 108384 GACATGACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATG 108443
|||||| ||| || || ||| | ||||||||||||||| || || ||||| || |
Sbjct 18416 GACATGCATGCAATTGCTAGGTTTGTCAAGTGGCAGTACTTTGAAGGTGATGTTTCCAAG 18475
Query 108444 GGGGCGCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCC 108503
|| || || || | |||||| || ||||| | | || | || ||| || ||
Sbjct 18476 GGCGCCCCCTACCCGCCCTGCAACGGCGTCCATGTGCGCTCCGTGTGTGTTTTTGGAGCA 18535
Query 108504 GGGGACCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGAC 108557
|| ||| || ||||||| | | | || ||| | || || || |||||||||
Sbjct 18536 GGTGACTTGAACTGGATGTTGCGCATGCACCACTTGTTTGCCAATAAGTTTGAC 18589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 348236664693654
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