Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq612 120 2e-22 >seq612 Length=937308 Score = 120 bits (132), Expect = 2e-22 Identities = 385/586 (66%), Gaps = 11/586 (2%) Strand=Plus/Minus Query 20033 TGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAG 20092 ||||| |||||||||| | | | | || || | ||||| ||||| | ||| | || | Sbjct 701072 TGAGAGATGAATTTCCTCTCTGA-CAACCCAATGTGTATTCTGGAAGGTTGTTTTGGAGG 701014 Query 20093 AGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGG-AGTT 20151 |||| || |||||||| || ||||| |||| | ||| || || || | |||| ||| Sbjct 701013 AGTTGTTGTGGTTTATCAAGGGATCCACAAGTGCTAAAGACCT-GTGGTCCAAGGGAGTG 700955 Query 20152 AAGATTTGGAGCGC--ACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACC 20209 | || ||| || ||| || | || | || | | ||| ||| | | Sbjct 700954 AGAATCTGGCATGCCAACA-GGTCCCCAG--ACTTCTGTATAGCCGGCGATGCTCCTGCA 700898 Query 20210 GTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAAT 20269 | |||| |||||| | || || || ||||| ||||| ||||| | ||| ||| | |||| Sbjct 700897 GAGAAGAAGGGGATGTAGGCCCAGTTTATGGCTTTCAGTGGAGGCTTTTGGGA-CAGAAT 700839 Query 20270 ATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTA 20329 | || ||| | || ||||| || ||||||||||| ||| | ||||| || | | Sbjct 700838 ACAAAGAAATGGATTCAGATTATGCAGGTCAAGGAGTAGACCAACTGCAAAAGGTGACTG 700779 Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 | || ||||| ||||| | |||||| |||| | | ||||| || || | |||| Sbjct 700778 ACACTATCAAAACCAACCCTGATGACAGAGGAATCACCCTGTGCGCTTGAAATCCAAAAG 700719 Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATA 20449 || | | | |||| | |||| || ||| || ||||| || ||||| | || | Sbjct 700718 ATCTTTTTCTCATGGAACTTCCTCTGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACA 700659 Query 20450 ATGAATTGTCGTG-TCAAATGTATC-AACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507 ||| ||| ||| ||| || | | || || || |||| || |||| || || Sbjct 700658 GTGAGCTGTTGTGAAGAAACCCTTCTAGAGGTCAGCCGACGTGGGCCTATGTGTGCCATT 700599 Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAAC 20567 ||| ||||| || || | ||||| || || || |||||| | | || || | || Sbjct 700598 CAACATTGCCAGCTACTCCCTGCTCACCTACGTGGTTGCACTTATCACGGACCTGAAGCA 700539 Query 20568 GGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613 ||| |||| || ||||| | |||| || || |||||||| ||| Sbjct 700538 AGGTAACTTGGTACACACTTTGAGAGATGCACACATTTACCTGAAT 700493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399147166668595