Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq612 120 2e-22
>seq612
Length=937308
Score = 120 bits (132), Expect = 2e-22
Identities = 385/586 (66%), Gaps = 11/586 (2%)
Strand=Plus/Minus
Query 20033 TGAGAAATGAATTTCCCTTATTAACTACGAAACGGGTATTTTGGAAAGGCGTTGTTGAAG 20092
||||| |||||||||| | | | | || || | ||||| ||||| | ||| | || |
Sbjct 701072 TGAGAGATGAATTTCCTCTCTGA-CAACCCAATGTGTATTCTGGAAGGTTGTTTTGGAGG 701014
Query 20093 AGTTATTATGGTTTATTAAAGGATCAACAAATTCTACCGAGCTTGTAGAAAAAGG-AGTT 20151
|||| || |||||||| || ||||| |||| | ||| || || || | |||| |||
Sbjct 701013 AGTTGTTGTGGTTTATCAAGGGATCCACAAGTGCTAAAGACCT-GTGGTCCAAGGGAGTG 700955
Query 20152 AAGATTTGGAGCGC--ACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACC 20209
| || ||| || ||| || | || | || | | ||| ||| | |
Sbjct 700954 AGAATCTGGCATGCCAACA-GGTCCCCAG--ACTTCTGTATAGCCGGCGATGCTCCTGCA 700898
Query 20210 GTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAAT 20269
| |||| |||||| | || || || ||||| ||||| ||||| | ||| ||| | ||||
Sbjct 700897 GAGAAGAAGGGGATGTAGGCCCAGTTTATGGCTTTCAGTGGAGGCTTTTGGGA-CAGAAT 700839
Query 20270 ATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTA 20329
| || ||| | || ||||| || ||||||||||| ||| | ||||| || | |
Sbjct 700838 ACAAAGAAATGGATTCAGATTATGCAGGTCAAGGAGTAGACCAACTGCAAAAGGTGACTG 700779
Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389
| || ||||| ||||| | |||||| |||| | | ||||| || || | ||||
Sbjct 700778 ACACTATCAAAACCAACCCTGATGACAGAGGAATCACCCTGTGCGCTTGAAATCCAAAAG 700719
Query 20390 ATGTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCTAATA 20449
|| | | | |||| | |||| || ||| || ||||| || ||||| | || |
Sbjct 700718 ATCTTTTTCTCATGGAACTTCCTCTGTGCCATGCCCTTTGCCAGTTCTACGTGGTGAACA 700659
Query 20450 ATGAATTGTCGTG-TCAAATGTATC-AACGATCCGCTGATATGGGACTGGGTGTTCCTTT 20507
||| ||| ||| ||| || | | || || || |||| || |||| || ||
Sbjct 700658 GTGAGCTGTTGTGAAGAAACCCTTCTAGAGGTCAGCCGACGTGGGCCTATGTGTGCCATT 700599
Query 20508 CAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAAAC 20567
||| ||||| || || | ||||| || || || |||||| | | || || | ||
Sbjct 700598 CAACATTGCCAGCTACTCCCTGCTCACCTACGTGGTTGCACTTATCACGGACCTGAAGCA 700539
Query 20568 GGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCTTAAT 20613
||| |||| || ||||| | |||| || || |||||||| |||
Sbjct 700538 AGGTAACTTGGTACACACTTTGAGAGATGCACACATTTACCTGAAT 700493
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399147166668595
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |