Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq56 98.7 8e-16 seq717 93.3 3e-14 >seq56 Length=5443799 Score = 98.7 bits (108), Expect = 8e-16 Identities = 150/212 (71%), Gaps = 10/212 (5%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| |||| || || ||||| | | ||| || ||| Sbjct 2722510 ACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTC------TGAGAGATA-TCCTCC 2722562 Query 45188 AGTTGTTTTCCGGCGAATATCAA---CCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244 || ||||| || || || |||| | |||| ||||| || || | ||||||||||| Sbjct 2722563 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 2722622 Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304 ||||| ||||| | ||| | |||| | ||| ||||||| || || ||| Sbjct 2722623 TGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGTC 2722682 Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||||||||||||||||||||| |||| Sbjct 2722683 TTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714 >seq717 Length=839118 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||||||||| ||| ||| ||||| || || |||| || ||| | || ||| Sbjct 563461 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCC 563520 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || ||||| || || || |||| |||| ||||| || || | ||||||||||| Sbjct 563521 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 563580 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 ||||| || || | | | |||| | ||| ||||| | || || |||||| Sbjct 563581 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 563640 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||||| |||||||||||||| ||||| Sbjct 563641 CCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395038745793991