Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq56 98.7 8e-16
seq717 93.3 3e-14
>seq56
Length=5443799
Score = 98.7 bits (108), Expect = 8e-16
Identities = 150/212 (71%), Gaps = 10/212 (5%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| ||| ||| |||| || || ||||| | | ||| || |||
Sbjct 2722510 ACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTC------TGAGAGATA-TCCTCC 2722562
Query 45188 AGTTGTTTTCCGGCGAATATCAA---CCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| ||||| || || || |||| | |||| ||||| || || | |||||||||||
Sbjct 2722563 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTCT 2722622
Query 45245 GCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTC 45304
||||| ||||| | ||| | |||| | ||| ||||||| || || |||
Sbjct 2722623 TGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGTC 2722682
Query 45305 TTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||||||||||||||||||||| ||||
Sbjct 2722683 TTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714
>seq717
Length=839118
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
||||||||||| ||| ||| ||||| || || |||| || ||| | || |||
Sbjct 563461 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCC 563520
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| ||||| || || || |||| |||| ||||| || || | |||||||||||
Sbjct 563521 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 563580
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
||||| || || | | | |||| | ||| ||||| | || || ||||||
Sbjct 563581 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 563640
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|||||||| |||||||||||||| |||||
Sbjct 563641 CCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395038745793991
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |