Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq927 288 1e-72 seq138 123 2e-23 >seq927 Length=612318 Score = 288 bits (318), Expect = 1e-72 Identities = 634/939 (68%), Gaps = 15/939 (2%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || || ||| | Sbjct 153566 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCTATTCT 153624 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 ||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| || Sbjct 153625 CTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 153684 Query 13975 CATAAAATCAAATGGATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAA 14034 ||| || |||||||| ||| | | || | || | |||| || || | | | Sbjct 153685 CATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAAAACCCAGCTCCAGCATAAG 153744 Query 14035 TCTATCCGCAATGAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTT 14094 ||| || || | || ||||| | || ||||||| |||||||| || || || || Sbjct 153745 TCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCTT 153804 Query 14095 TACAGGAATTATATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAAT 14154 || || | | | || | || || | |||||| ||||| | | || || | Sbjct 153805 CACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATT-T 153863 Query 14155 CGTAATAATTTCA--TTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAA 14212 | | | |||| | ||||| | | | || ||||| || || | || ||||| Sbjct 153864 CTTTG-ACTTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAG 153922 Query 14213 TCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATC 14272 ||||| || | ||||||||||| |||||||||||||| |||||||| | || | |||| Sbjct 153923 TCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATC 153982 Query 14273 AATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCA 14332 | ||||| ||| || | ||| ||||| | || || || || |||||||| ||||| || Sbjct 153983 AGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCC 154042 Query 14333 ACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTT 14392 ||||| ||||| |||| | ||||||||| | | || | ||||| | ||||| Sbjct 154043 ACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGC 154102 Query 14393 CTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGT 14452 ||||| || | || || || | | || |||||| ||||| || || || | | Sbjct 154103 AAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACAC 154162 Query 14453 TCCTTCTCTTTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGT 14512 ||| | || || | | | ||| || || ||| | || | |||||||| ||||| ||| Sbjct 154163 TCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATGT 154222 Query 14513 ATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTCT 14572 || ||||||| || || || || ||||| ||||| | ||||||| || | ||| Sbjct 154223 TTG-TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCT 154281 Query 14573 GAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGC- 14631 | ||| | || |||| |||||||| ||||| |||||||| || ||||| || || Sbjct 154282 TGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCA 154341 Query 14632 -CAATATGTTTTTAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCT--AA 14688 || ||| | ||||| ||| ||| ||| | || || ||| | ||| | Sbjct 154342 AGAACATGGGAT--ATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGT--GCTGGAG 154397 Query 14689 ATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACAT 14748 ||||| || ||||| ||||| ||| |||||||||| ||| | ||||| |||||||| Sbjct 154398 GTCCTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACAT 154457 Query 14749 TACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 ||| || || | ||| |||||||| || ||||| Sbjct 154458 CTGCCAAATATCATGGTATTCGATAGGAAAGACGACAAA 154496 >seq138 Length=3455650 Score = 123 bits (136), Expect = 2e-23 Identities = 109/136 (80%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 14226 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 14285 |||||||||| |||||||||||||| |||||||| | || ||||||| ||||||||| | Sbjct 2542790 CCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2542849 Query 14286 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14345 | | ||| ||||| | || || || ||||||||||| ||||| || ||||| ||||| | Sbjct 2542850 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAG 2542909 Query 14346 CTATTAATCGTTCTCC 14361 | | | |||||||| Sbjct 2542910 CCACAACACGTTCTCC 2542925 Score = 95.1 bits (104), Expect = 1e-14 Identities = 106/139 (76%), Gaps = 2/139 (1%) Strand=Plus/Plus Query 13856 TAAAAATCAACATCTAACGAAAAAACATTATCGTCTTTGT-TAGAAATAACGCCCATTTT 13914 || || ||| |||| || | |||| ||| || | || | | || || || |||||| | Sbjct 2541260 TAGAAGTCAGCATCCAAGGTAAAAGAATTCTC-TGTTGGACTTGACATCACTCCCATTCT 2541318 Query 13915 TTGATATTCACTAACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTC 13974 ||||| || | ||||| || |||||||||||||| || ||||||||||| ||||| || Sbjct 2541319 CTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCTC 2541378 Query 13975 CATAAAATCAAATGGATTT 13993 ||| || |||||||| ||| Sbjct 2541379 CATGAAGTCAAATGGGTTT 2541397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482299952018280