Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq927 156 4e-33
seq636 116 3e-21
seq265 96.9 3e-15
seq5307 93.3 4e-14
seq808 86.0 6e-12
seq331 82.4 7e-11
>seq927
Length=612318
Score = 156 bits (172), Expect = 4e-33
Identities = 585/902 (65%), Gaps = 29/902 (3%)
Strand=Plus/Minus
Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599
|||||| | ||||| || ||||| | || |||||| | ||||| || || || || ||
Sbjct 154496 TTTGTCGTCTTTCCTATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCT 154437
Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG-AGCGATTGGGATTCCCT 57658
|| |||||||| | || ||||| || || || ||||| || ||| | ||||| ||||
Sbjct 154436 TCCTTTTGGACAGCTGAGGAAGTGGATCTCTCCAAGGACCTCCAGC-ACTGGGAAGCCCT 154378
Query 57659 CAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGATGG 57718
|| ||||||| ||||||| || || | || || || || || |||||
Sbjct 154377 GAAGCCTGATGAGAGATATTTTATATCCCATGTTCTTGCTTTCTTTGCTGCGAGTGATGG 154318
Query 57719 TATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGCGAG 57778
|| || || || || ||||| || | ||| |||||| | || | || || || |
Sbjct 154317 CATAGTCAATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAATTCAGATTACAGAAGCCCG 154258
Query 57779 ATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCTACT 57838
|| || || || || ||| | ||||| |||| | ||||| || |||||| || ||
Sbjct 154257 CTGTTTCTATGGCTTCCAAATTGCCATGGAAA-CAAACATTCTGAGATGTATAGTCTCCT 154199
Query 57839 CATCGATACGTACGTGAAGGACAACGACGAGAAACGTAGA--CTGTTCAACGCGATCGAA 57896
|| || ||||| | || || | | || || | || || |||||||| || ||
Sbjct 154198 CAATGACACGTATATTAAAGATTCCAAGGA--AAGGGAGTGTCTCTTCAACGCCATTGAG 154141
Query 57897 ACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGAT-----AAAAAGCG 57951
|||||||| || ||||||||||| ||| | | ||||| | ||||
Sbjct 154140 ACAATGCCTTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGGGACAAAG-- 154083
Query 57952 CCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTT 58011
||| || | | || | | | || || ||||| || ||||| || |||||||
Sbjct 154082 ---AGGCTACCTATGGAGAACGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTT 154026
Query 58012 CGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGT 58071
| || ||||| | ||||| ||| | |||||| | || |||||| | ||||| || |
Sbjct 154025 CTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCTCACAT 153966
Query 58072 TTAGCAACGAGTTGATATCGC-GCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATG 58130
|| |||||| | || | || | || |||||| | || ||| ||||| ||||| |||
Sbjct 153965 TTTCCAACGAACTTAT-TAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATG 153907
Query 58131 TACTCTCACATTGTCAATAAACCGACGCGGGATCGCATCTTGGACATTATCACCGAGGCG 58190
| | ||| | | | ||||| || | | || || || || | | ||
Sbjct 153906 TTCAAACACCTGATACACAAACCTTCGGAGCAGAAAGTCAAAGAAATAATTGTCAATGCT 153847
Query 58191 GTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTC---GGTATG 58247
|| ||| ||| | ||||| |||| || || | |||||| | |||| || |||
Sbjct 153846 GTAAGGATAGAACAGGAGTTCCTCACAGAGGCATTGCCGGTG---AAGCTCATTGGGATG 153790
Query 58248 AACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG 58307
|| ||| ||| ||| |||||| ||||| || ||||||||| |||| || |||
Sbjct 153789 AATTGCACTTTAATGAAGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTG 153730
Query 58308 ATTGGAGAGCGTCATTACAACACGA-AAAATCCGTTTGATTTTATGAATCTGATCTCGCT 58366
| ||| ||| | | | |||| || ||||| || ||| | || || ||
Sbjct 153729 GGT-TTTAGCAAGATTTTCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACT 153671
Query 58367 CGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCA-AAAATACGGCGTGA 58425
|| || ||||| ||||| || || || | ||| | || ||||| | |||| || ||||
Sbjct 153670 GGAAGGGAAGACTAACTTCTTTGAGAAGAGAGTAGGAGAGTATCAGAGAATA-GGAGTGA 153612
Query 58426 TG 58427
||
Sbjct 153611 TG 153610
>seq636
Length=1077480
Score = 116 bits (128), Expect = 3e-21
Identities = 115/149 (77%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 23048 ACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTG 23107
||||| |||||| || |||||||| ||||| || || || ||||| || || |||||
Sbjct 900636 ACCTCATCTTTGCTTGTATACTCTACTATTTCTGTGCACAGGTTGCTGCATTTGATCGTT 900577
Query 23108 CCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTG 23167
|||| || |||||||||||| || || || ||||| |||||||||||||| || ||
Sbjct 900576 CCCAGGTTCTGCTGGTTGCTTTTCCGGTTACAGGAATCTTTGTAGAGCATGTATGGGGTA 900517
Query 23168 CCCGTCTCGACCTGCGACTCGATGATCGC 23196
|| ||||| ||| ||||| ||||| ||
Sbjct 900516 CCTGTCTCTGTCTGAGACTCAATGATGGC 900488
>seq265
Length=2261556
Score = 96.9 bits (106), Expect = 3e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || || || || || || |||||| |||| ||||||||
Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | | || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 841091
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 841092 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 841133
>seq5307
Length=1324
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| || || || ||||| ||||| ||||| || ||||| | || || || ||
Sbjct 729 ATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCAGT 788
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | | || | | |||| | ||| |||||||| ||| | || || ||||||
Sbjct 789 GACACTATTGAGAATGCCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACCAG 848
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || || || ||||||||| |||| || ||| | || |||||
Sbjct 849 CAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATAAT 908
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
|| || ||||| || ||||| || |||| ||| | ||| | || ||||
Sbjct 909 ATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGGTA 957
>seq808
Length=762264
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
||||| |||||| | || || || || || || || |||||| |||| |||||||| ||
Sbjct 447812 ATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTCA 447871
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|| | | |||| || || | || ||| |||||||| | || || || |||
Sbjct 447872 GATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCAG 447931
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCT-ATGACTATGAGCGATTATAA 31371
|| | || || || |||||||| || ||||||| || || || || || ||
Sbjct 447932 CAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCT-TGTCTGACTACAA 447990
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||| || || ||||||||||| || | |||||
Sbjct 447991 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 448029
>seq331
Length=2147541
Score = 82.4 bits (90), Expect = 7e-11
Identities = 153/222 (69%), Gaps = 2/222 (1%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||| |||||||| || || | || || || || |||||| || | | ||||||
Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| || | | |||| || || | || ||| |||||||| | || || ||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATG-ACTATGAGCGATTA 31368
||||| | | || || |||||||| || ||||||| | | | ||| || || ||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGA-TGGACGTACTTTGTCTGACTA 851417
Query 31369 TAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACT 31410
||||||||||| || || ||||||||||| || | |||||
Sbjct 851418 CAACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACT 851459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445724213782320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |