Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq927 138 2e-27 >seq927 Length=612318 Score = 138 bits (152), Expect = 2e-27 Identities = 300/448 (67%), Gaps = 21/448 (5%) Strand=Plus/Minus Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975 |||| || ||||| ||||| ||||||||||||||| |||| | || ||||| || |||| Sbjct 154061 TTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 154002 Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035 || ||||||| | || | || |||| ||||| | ||||| || | ||| || | Sbjct 154001 GGCTCAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAG 153942 Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095 | || ||| | || | |||||||| ||| || |||| ||| | |||||| | Sbjct 153941 ATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA-------CCTGATACAC 153889 Query 102096 CATC------AAGAGAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146 | | | |||||| | || |||||||| | || || | || |||| Sbjct 153888 AAACCTTCGGAGCAGAAAG--TCAAAGAAATAATTGTCA---ATGCTGTAAGGATAGAAC 153834 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 | || || ||||||| | |||| || || | | || ||||| |||| || |||| Sbjct 153833 AGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATTGCACTTTAATGA 153774 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266 |||| |||||||||||||||||| | ||| || | || |||| | ||| | Sbjct 153773 AGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTTTTAGCAAGATTT 153714 Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326 | || ||||| || |||||||| |||||||| || || ||||| |||| Sbjct 153713 TCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGACTAACT 153654 Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCA 102354 | ||||| |||||||| | |||||||| Sbjct 153653 TCTTTGAGAAGAGAGTAGGAGAGTATCA 153626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989488006950305