Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq927 138 2e-27
>seq927
Length=612318
Score = 138 bits (152), Expect = 2e-27
Identities = 300/448 (67%), Gaps = 21/448 (5%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| || ||||| ||||| ||||||||||||||| |||| | || ||||| || ||||
Sbjct 154061 TTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCT 154002
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| ||||||| | || | || |||| ||||| | ||||| || | ||| || |
Sbjct 154001 GGCTCAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAG 153942
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCC 102095
| || ||| | || | |||||||| ||| || |||| ||| | |||||| |
Sbjct 153941 ATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTTCAAACA-------CCTGATACAC 153889
Query 102096 CATC------AAGAGAAAGGATTCTTGA---AATTGTCACTGAAGCCGTCCGAATTGAAC 102146
| | | |||||| | || |||||||| | || || | || ||||
Sbjct 153888 AAACCTTCGGAGCAGAAAG--TCAAAGAAATAATTGTCA---ATGCTGTAAGGATAGAAC 153834
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
| || || ||||||| | |||| || || | | || ||||| |||| || ||||
Sbjct 153833 AGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATTGCACTTTAATGA 153774
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
|||| |||||||||||||||||| | ||| || | || |||| | ||| |
Sbjct 153773 AGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTTTTAGCAAGATTT 153714
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326
| || ||||| || |||||||| |||||||| || || ||||| ||||
Sbjct 153713 TCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGACTAACT 153654
Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCA 102354
| ||||| |||||||| | ||||||||
Sbjct 153653 TCTTTGAGAAGAGAGTAGGAGAGTATCA 153626
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989488006950305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |