Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq265 100 3e-16
seq331 95.1 1e-14
seq647 93.3 4e-14
seq808 89.7 5e-13
seq920 82.4 8e-11
>seq265
Length=2261556
Score = 100 bits (110), Expect = 3e-16
Identities = 146/204 (72%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || || | || | ||||| || ||
Sbjct 841118 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTG 841060
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||| | | ||||||||| ||||| || ||||| || || ||| ||
Sbjct 841059 CTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 841000
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|||| | ||| | ||| || | ||| || ||||| | ||| | ||||| |||||
Sbjct 840999 GGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCGGT 840940
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
| ||||| ||||| || |||||
Sbjct 840939 AAGGGTTTTCACGAAAATCTGCAT 840916
>seq331
Length=2147541
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/204 (71%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTG 139620
|||| || ||||| ||||||||||| || || || || | || | ||||| || ||
Sbjct 851444 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTG 851386
Query 139621 TTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTT 139680
|| |||||| ||||| | | ||||||||| ||||| || ||||| || || ||| ||
Sbjct 851385 CTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTT 851326
Query 139681 TTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGT 139740
|||| | ||| | ||| || | ||| || ||| | ||| | ||||| |||||
Sbjct 851325 GGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGTCTTCCCGGT 851266
Query 139741 CAACGTTTTTACGAATATTTGCAT 139764
|| ||||| ||||| || |||||
Sbjct 851265 AAAGGTTTTCACGAAAATCTGCAT 851242
>seq647
Length=1105866
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACC 139626
|| ||||| ||||||||||| || || || |||| || | ||||| || || || ||
Sbjct 850247 GTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCA-TCTTCCAGTTGCTTGCC 850189
Query 139627 AGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTT 139686
|| | ||||||| | ||||||||| ||||| || ||||| || || ||| || ||
Sbjct 850188 AGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTT 850129
Query 139687 TAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
|| | ||| | ||| || | ||| || |||||| || || ||||| || || | |||
Sbjct 850128 TACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGT 850069
Query 139747 TTTTACGAATATTTGCAT 139764
|| | ||| || |||||
Sbjct 850068 TTCCATGAAAATCTGCAT 850051
>seq808
Length=762264
Score = 89.7 bits (98), Expect = 5e-13
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 139562 TGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCA--TTGTGCTCGAGTCTTCGAGCT 139619
|||| || ||||| ||||||||||| || || || | || || | ||||| || |
Sbjct 448014 TGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATG-TCCA-TCTTCCAGTT 447957
Query 139620 GTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTT 139679
| || |||||| ||||||| | ||||||||| ||||| || ||||| || || ||| |
Sbjct 447956 GCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCT 447897
Query 139680 TTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGG 139739
| |||| | ||| | ||| || | ||| || ||||| | ||| | ||||| || |
Sbjct 447896 TGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATGGTCTTCCCAG 447837
Query 139740 TCAACGTTTTTACGAATATTTGCAT 139764
| | ||||| | ||| || |||||
Sbjct 447836 TAAGGGTTTTCATGAAAATCTGCAT 447812
>seq920
Length=534542
Score = 82.4 bits (90), Expect = 8e-11
Identities = 136/194 (70%), Gaps = 2/194 (1%)
Strand=Plus/Plus
Query 139572 ACTCTTTTTGAATGTTATAATCGCTCATTGTGC-TCGAGTCTTCGAGCTGTTTACCAGCA 139630
|||| ||||||||||| || || || || | || | ||||| || || || ||||||
Sbjct 150038 ACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCA-TCTTCCAGTTGCTTGCCAGCA 150096
Query 139631 TAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC 139690
||||||| | ||||||||| ||||| || ||||| || | ||| || ||||
Sbjct 150097 AAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATTCTGGATCTTGGCCTTTACA 150156
Query 139691 TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTT 139750
| ||| ||| || | ||| || |||| | ||| | ||||| || || | |||||
Sbjct 150157 TTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGTCTTCCCAGTAAGGGTTTTC 150216
Query 139751 ACGAATATTTGCAT 139764
||||| || |||||
Sbjct 150217 ACGAAAATCTGCAT 150230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496017053743200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |