Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq927 390 2e-103
seq138 132 7e-26
seq636 131 2e-25
seq1 109 8e-19
seq156 100 4e-16
>seq927
Length=612318
Score = 390 bits (432), Expect = 2e-103
Identities = 651/936 (70%), Gaps = 11/936 (1%)
Strand=Plus/Plus
Query 49613 TTTAAAAGTCAACATCTAGAGAAAAATGATTATCTTCTTGA---GACATAACTCCCATTT 49669
|||| |||||| |||| | | |||| ||| ||| | || ||||| ||||| |||
Sbjct 153564 TTTAGAAGTCAGCATCCAAGGTAAAAGAATTCTCTGTTGGACTTGACATCACTCCTATTC 153623
Query 49670 TTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAATGATATATTTT 49729
| || || || || || | || || || || ||||| || ||||||| ||| ||||| |
Sbjct 153624 TCTGATACTCTCCTACTCTCTTCTCAAAGAAGTTAGTCTTCCCTTCCAGTGAAATATTCT 153683
Query 49730 CCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATCA 49789
||||||| ||||| || || || | |||| || |||| |||| || || |
Sbjct 153684 CCATGAAGTCAAATGGGTTTTCTACTCTGAAAATCTTGCTAAAACCCAGCTCCAGCATAA 153743
Query 49790 ATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTT 49849
||| || || |||||||| || | ||||| | |||||||| || || || |
Sbjct 153744 GTCTGTCTGCCACAAATTCAATGCACTGCTTCATTAAAGTGCAATTCATCCCAATGAGCT 153803
Query 49850 TAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCTGTTATAATAG 49909
| || || | ||| | || || || || ||||| || ||| |||| || ||
Sbjct 153804 TCACCGGCAATGCCTCTGTGAGGAACTCCTGTTCTATCCTTACAGCATTGACAATTATTT 153863
Query 49910 ATCTAACGGTTTCTTCACTC--GGTGGATGCAATAAATGTTTAAACATCAAACATGCGAA 49967
| | || ||||| | | ||| || | | ||||| ||||||| || || ||
Sbjct 153864 CTTTGAC--TTTCTGCTCCGAAGGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAA 153921
Query 49968 ATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCAT 50027
|| ||||| | |||||| ||||| ||||| |||||||||||||| ||||| || | |||
Sbjct 153922 GTCACAGTGTAAACCCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACAT 153981
Query 50028 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTC 50087
|| || | || || ||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct 153982 CAGTCCTCATTTCTTGAGCCAGAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTC 154041
Query 50088 TACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC---TGTCATGTATCCACTT 50144
||||||||||| || |||| | |||||||| | || |||| |||||
Sbjct 154042 CACTGCGGCAAAAGCTACAACACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACG 154101
Query 50145 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 50204
|||||||| |||||||| || ||||||||||| || || ||||| || |||||| |
Sbjct 154102 CAAGGCCCAATCTGCCTTCTTCTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACA 154161
Query 50205 GtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATG 50264
| |||| || |||||||| ||| || || | | ||||||||||| || |||||
Sbjct 154162 CTCCCTTTCCTTGGAATCTTTAATATACGTGTCATTGAGGAGACTATACATCTCAGAATG 154221
Query 50265 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTC 50324
|| |||| ||||| || || || || |||||||| | || || |||||||| | |||
Sbjct 154222 TTTG-TTTCCATGGCAATTTGGAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTC 154280
Query 50325 TGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGC 50384
| | ||| || || | || |||||||| ||||| || ||||| || ||||| || ||
Sbjct 154281 TTGGCTAAACCGCTCCACCAAGTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGC 154340
Query 50385 CAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAATCATTGATATC 50444
| ||||| |||||||| | | || | || | || | ||| | | || ||
Sbjct 154341 AAGAACATGGGATATAAAATATCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTC 154400
Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504
|| || | ||| ||||| || |||||||||| || ||||| || || |||||||| |
Sbjct 154401 CTTGGAGAGATCCACTTCCTCAGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTG 154460
Query 50505 CCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540
||| || ||||| |||| ||| || || | |||||
Sbjct 154461 CCAAATATCATGGTATTCGATAGGAAAGACGACAAA 154496
>seq138
Length=3455650
Score = 132 bits (146), Expect = 7e-26
Identities = 105/126 (83%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041
|||| ||||| ||||| |||||||||||||| ||||| || ||||| || || || || |
Sbjct 2542790 CCTCATCTCTGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGGCATCAGTCCTCGTTTCT 2542849
Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101
| ||||| ||||| || ||||| || || ||||||||||||||||| ||||||||||| |
Sbjct 2542850 TGAGCCAGAATATCGATGCAAAAGAACCGGAAAAGAAGATTCCTTCCACTGCGGCAAAAG 2542909
Query 50102 CAACAA 50107
| ||||
Sbjct 2542910 CCACAA 2542915
Score = 87.8 bits (96), Expect = 3e-12
Identities = 83/106 (78%), Gaps = 0/106 (0%)
Strand=Plus/Plus
Query 50220 ATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 50279
|||||||| |||||| || || | ||||||||||| || ||||| |||||||| |||||
Sbjct 2544461 ATCTTTAATATAAGTGTCAATGAGGAGACTATACATCTCAGAATGTATGTTTTCCATGGC 2544520
Query 50280 CATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCT 50325
|| || || || ||||| || | || || |||||||| | ||||
Sbjct 2544521 AATTTGGAAGCCATAGAAGCAGCGGGCTTCTGTAATCTGAATTTCT 2544566
>seq636
Length=1077480
Score = 131 bits (144), Expect = 2e-25
Identities = 111/137 (81%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 79060 ACTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACC 79119
|| ||||||||||| ||||| ||||| |||||||| || || |||||||||||||| |
Sbjct 918553 ACCTGAAATTCTCCTGACAAGACTCTACGAGTGTAGATGTTGCTGGTATATGGTTCAATG 918494
Query 79120 GATTCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAA 79179
|| ||||||||||||| ||| ||||||||||| || || ||||| || || | | ||||
Sbjct 918493 GACTCATTATTTCCCAGAATCTGAGCAGTTGAAGCAGTAGGCATCGGGGCAATAAGTAAA 918434
Query 79180 CTATTTCTAAGACCGTA 79196
||||| || | ||| ||
Sbjct 918433 CTATTCCTTATACCATA 918417
Score = 98.7 bits (108), Expect = 1e-15
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 79939 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 79998
||||||||||| |||||||| ||||||||||| || | || || || |||| | |||
Sbjct 899269 ACTCGTTTCATGAAGAGATCTGGAATCCAAAGGGCAAAGAAAAGGTCCCTGGCACGCTGC 899210
Query 79999 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 80058
|| || |||||||| ||||| || | ||| || ||| | | || || ||||||| |||
Sbjct 899209 TCTTCCTTTCCTGTGTTCTTCTTTAAATCAAGAAACTCAAAGATGTCTAAATGCCAAGGT 899150
Query 80059 TCCAAGTATATGGC 80072
|||| ||| || ||
Sbjct 899149 TCCAGGTAAATAGC 899136
Score = 98.7 bits (108), Expect = 1e-15
Identities = 135/189 (71%), Gaps = 0/189 (0%)
Strand=Plus/Minus
Query 79299 GTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTA 79358
||| |||||||| || || | || | ||| | ||||| || || || || ||||| ||
Sbjct 906288 GTAGGTTTCATATGGGCCATGCTCCTTGGCCAGATCACAGCTGGCTTCCAAGGCTCCATA 906229
Query 79359 ATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATA 79418
|||||||||||| || || | |||||| | || || ||| | || ||||| |||||
Sbjct 906228 ATAAATGGTTTCAAAGATTTGCTTATTCAATAACTGGGCCTCTGGACTCTCAAAAGGATA 906169
Query 79419 ATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCT 79478
| | |||||||| || ||||| | ||||| || ||||| || || || | ||| |
Sbjct 906168 CCTCATCAGAATAAAAGCATCTGCCAGACCTTGTACTCCAATTCCAATGGGGCGATGGCG 906109
Query 79479 CTTATTAGA 79487
||||| ||
Sbjct 906108 TTTATTTGA 906100
Score = 89.7 bits (98), Expect = 7e-13
Identities = 115/159 (72%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 80314 CTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAAC 80373
||||| | ||| | || | || || ||||| || | || |||||||| || ||||||
Sbjct 891308 CTAGAAAGTTGTGGGCGGTTTGTACCAGCATTGAAGAGAGTGGGAGAAGCATGGGTAAAC 891249
Query 80374 CATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGAATT 80433
|| | ||||| || || ||||| || |||||||| | || ||||| || |||||
Sbjct 891248 CACCTCTCAGAAAGAAGGTTGTATGTTTCAATAGCAGCATCAATATCTTCTTCGTGAATC 891189
Query 80434 CCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCA 80472
|| || | || | ||| ||||| || ||||||||||||
Sbjct 891188 CCCACAGATACCCTCATCAACATATGTTGAGGTCTTTCA 891150
>seq1
Length=12387654
Score = 109 bits (120), Expect = 8e-19
Identities = 180/257 (70%), Gaps = 7/257 (3%)
Strand=Plus/Minus
Query 47703 TCCAGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCC 47760
|||||| || ||||| ||| ||| | ||| | ||| ||||| | || ||||||
Sbjct 7595573 TCCAGTGGAACCAAAACCTCCTGAACCCCTTTTAGTGTC--ATCTAAAACTTAGACTTCC 7595516
Query 47761 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 47820
|| | ||| |||||| | || |||| | | || ||||| || |||| || ||| | ||
Sbjct 7595515 TCTATTTCAGGATAAAAAATCCGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 7595456
Query 47821 ACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 47880
|| | ||| | ||| ||| ||||| || | || || || ||||| || ||||||
Sbjct 7595455 ACTTCAAACTTTTCTTTGCCAAAATTAAACAGTACAACACCAATATTTCCTCTGTAATCT 7595396
Query 47881 TCGTCTATTACACCACCTCCTATATCAATG---CCTTTTAGTGACAGTCCAGACCTAGGA 47937
|| ||||| |||||| |||||||||||||| |||| | || ||||| | |||
Sbjct 7595395 TCATCTATGACACCAGCTCCTATATCAATGAAATATTTTGCAGCCAAGCCAGAACATGGA 7595336
Query 47938 GCTATTCTACCATAGCA 47954
||| ||| ||||||||
Sbjct 7595335 ACTACTCTTCCATAGCA 7595319
>seq156
Length=3029033
Score = 100 bits (110), Expect = 4e-16
Identities = 151/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 47703 TCCAGTTGATCCAAACCCT--TGAGCTCCTCTATCTGTACTATCTAGAGATTGTACTTCC 47760
|||||| || ||||| ||| ||||| ||| | ||| ||||| | ||| ||||||
Sbjct 18943 TCCAGTGGAACCAAAACCTCCTGAGCCCCTTTCAGTGTC--ATCTAAAACTTGAACTTCC 19000
Query 47761 TCCAGTTCTGGATAATATATACGTTGATAGATTAGCTGAGCTATTCTATCTCCCGTATTT 47820
|| | |||||||||| | || ||| | | || ||||| || |||| || ||| | ||
Sbjct 19001 TCTATTTCTGGATAAAA-ATCTGTTCACAAATGAGCTGTGCAATTCGGTCACCCTTTTTG 19059
Query 47821 ACATTGAACGTACATTTTCCATTATTAATAAGAATGACTCCTATGTTTCCCCTATAATCT 47880
|| | ||| | ||| ||| ||||| || | || || || ||||| |||||||||
Sbjct 19060 ACTTCAAACTTTTCTTTGCCAA-ATTAAACAGTACAACACCAATATTTCCTCTATAATCT 19118
Query 47881 TCGTCTATTACACCACCTCCTATATCAATG 47910
|| ||||| |||||| |||||| ||| |||
Sbjct 19119 TCATCTATGACACCAACTCCTACATCTATG 19148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718200824836440
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