Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq927 174 2e-38 >seq927 Length=612318 Score = 174 bits (192), Expect = 2e-38 Identities = 569/877 (65%), Gaps = 23/877 (3%) Strand=Plus/Minus Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057 ||||| ||| || ||||| |||||| | ||||| || || || |||| ||||||||| Sbjct 154487 TTTCCTATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTTTGG 154428 Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117 || | || || || ||||| ||||||||||| | | ||||| | | | |||| Sbjct 154427 ACAGCTGAGGAAGTGGATCTCTCCAAGGACCTCCAGCACTGGGAAGCCCTGAAGCCTGA- 154369 Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177 |||| || | |||||||| || || | || |||||||| | ||||| || ||| Sbjct 154368 --TGAGAGATATTTTATATCCCATGTTCTTGCTTTCTTTGCTGCGAGTGATGGCATAGTC 154311 Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT 125237 || || || || || || || ||||| | ||| |||| | || || Sbjct 154310 AATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAATTCAGATTACAGAAGCCCGCTGTTTC 154251 Query 125238 TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297 || || |||||||| || || ||| || || || ||||| | || | |||| Sbjct 154250 TATGGCTTCCAAATTGCCATGGA-AACAAACATTCTGAGATGTATAGTCTCCTCAATGAC 154192 Query 125298 ATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCC 125356 | ||| ||| ||| | ||| | || || ||||| ||||| || || || |||| Sbjct 154191 ACGTATATTAAAGATTC-CAAGGAAAGGGAGTGTCTCTTCAACGCCATTGAGACAATGCC 154133 Query 125357 GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTA 125416 | | | || ||||| | |||| | || ||||| | ||| | || || | || Sbjct 154132 TTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTA 154073 Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476 | || | | || || || ||||| || || || ||||||||||| ||| |||||| Sbjct 154072 TGGAGAACGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGC 154013 Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT----AACG 125532 | || || ||||||||||| | ||||| ||| | || || |||| | |||| Sbjct 154012 ATCGATATTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCT----CACATTTTCCAACG 153957 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592 | |||| |||| ||||| ||||||||||||||||| || |||| ||| Sbjct 153956 AACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT---CAAAC 153900 Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652 | ||| | | | | | | | | |||| |||| | || | | |||| | Sbjct 153899 ACCTGATACACAA----ACCTTCGGAGCAGAAA--GTCAAAGAAATAATTGTCAATGCTG 153846 Query 125653 TGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACT 125712 | ||||||||||| ||||| || || || | | ||||| | | ||||| ||||| | Sbjct 153845 TAAGGATAGAACAGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATT 153786 Query 125713 GCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTG 125772 ||| ||||| ||| ||| || ||||||||||| | || || ||| || | Sbjct 153785 GCACTTTAATGAAGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTT 153726 Query 125773 GCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832 ||||||||| || | | || || ||||| |||||| | || ||||| || | Sbjct 153725 TTAGCAAGATTTTCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAG 153666 Query 125833 GTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 | ||||| ||||| || ||||||| || | ||||| Sbjct 153665 GGAAGACTAACTTCTTTGAGAAGAGAGTAGGAGAGTA 153629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 740989068009960