Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq927 174 2e-38
>seq927
Length=612318
Score = 174 bits (192), Expect = 2e-38
Identities = 569/877 (65%), Gaps = 23/877 (3%)
Strand=Plus/Minus
Query 124998 TTTCCCATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGG 125057
||||| ||| || ||||| |||||| | ||||| || || || |||| |||||||||
Sbjct 154487 TTTCCTATCGAATACCATGATATTTGGCAGATGTATAAGAAAGCGGAGGCTTCCTTTTGG 154428
Query 125058 ACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAA 125117
|| | || || || ||||| ||||||||||| | | ||||| | | | ||||
Sbjct 154427 ACAGCTGAGGAAGTGGATCTCTCCAAGGACCTCCAGCACTGGGAAGCCCTGAAGCCTGA- 154369
Query 125118 ACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTC 125177
|||| || | |||||||| || || | || |||||||| | ||||| || |||
Sbjct 154368 --TGAGAGATATTTTATATCCCATGTTCTTGCTTTCTTTGCTGCGAGTGATGGCATAGTC 154311
Query 125178 AACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTT 125237
|| || || || || || || ||||| | ||| |||| | || ||
Sbjct 154310 AATGAAAACTTGGTGGAGCGGTTTAGCCAAGAAATTCAGATTACAGAAGCCCGCTGTTTC 154251
Query 125238 TACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGAC 125297
|| || |||||||| || || ||| || || || ||||| | || | ||||
Sbjct 154250 TATGGCTTCCAAATTGCCATGGA-AACAAACATTCTGAGATGTATAGTCTCCTCAATGAC 154192
Query 125298 ATGTACATTCGCGATCCGCAACGTAAACACATG-CTCTTTAACGCAATCGACACGGTGCC 125356
| ||| ||| ||| | ||| | || || ||||| ||||| || || || ||||
Sbjct 154191 ACGTATATTAAAGATTC-CAAGGAAAGGGAGTGTCTCTTCAACGCCATTGAGACAATGCC 154133
Query 125357 GTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTA 125416
| | | || ||||| | |||| | || ||||| | ||| | || || | ||
Sbjct 154132 TTGTGTCAAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTA 154073
Query 125417 CGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGC 125476
| || | | || || || ||||| || || || ||||||||||| ||| ||||||
Sbjct 154072 TGGAGAACGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGC 154013
Query 125477 GGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGT----AACG 125532
| || || ||||||||||| | ||||| ||| | || || |||| | ||||
Sbjct 154012 ATCGATATTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCT----CACATTTTCCAACG 153957
Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACT 125592
| |||| |||| ||||| ||||||||||||||||| || |||| |||
Sbjct 153956 AACTTATTAGCAGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGTT---CAAAC 153900
Query 125593 ATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCG 125652
| ||| | | | | | | | | |||| |||| | || | | |||| |
Sbjct 153899 ACCTGATACACAA----ACCTTCGGAGCAGAAA--GTCAAAGAAATAATTGTCAATGCTG 153846
Query 125653 TGAGGATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACT 125712
| ||||||||||| ||||| || || || | | ||||| | | ||||| ||||| |
Sbjct 153845 TAAGGATAGAACAGGAGTTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATT 153786
Query 125713 GCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTG 125772
||| ||||| ||| ||| || ||||||||||| | || || ||| || |
Sbjct 153785 GCACTTTAATGAAGCAGTGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTT 153726
Query 125773 GCCGCAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGG 125832
||||||||| || | | || || ||||| |||||| | || ||||| || |
Sbjct 153725 TTAGCAAGATTTTCAGAGTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAG 153666
Query 125833 GTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869
| ||||| ||||| || ||||||| || | |||||
Sbjct 153665 GGAAGACTAACTTCTTTGAGAAGAGAGTAGGAGAGTA 153629
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740989068009960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |