Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_004745.1 Length=30728 Score E Sequences producing significant alignments: (Bits) Value seq5431 80.6 5e-11 >seq5431 Length=1301 Score = 80.6 bits (88), Expect = 5e-11 Identities = 98/134 (73%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 23397 TCAGGCGCAAGGTGCGCATAGGCCATCGTCTGCTGAATGCTCGCATGTCCCAGAATCTGT 23456 || ||||||||||||||||| ||||||| | | ||||| ||||| |||| | Sbjct 740 TCCGGCGCAAGGTGCGCATACCTCATCGTCATATTCAGCGAGGCATGGCCCAGGATCTCT 799 Query 23457 TGCAGTGCGATTATATTGCCCCCGTTCATCATGAAATGGCTTGCGAATGTATGCCGCAGG 23516 | ||| | | |||| ||| ||| ||| ||||| || |||||| || ||||||||| Sbjct 800 TTCAGCGTCACGATATGGCCACCGCCCATGATGAAGTGAGCTGCGAACGTGTGCCGCAGG 859 Query 23517 ATGTGGGTTGCCTG 23530 |||||| |||| || Sbjct 860 ATGTGGCTTGCTTG 873 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 98199170548380