Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_004914.3
Length=62706
Score E
Sequences producing significant alignments: (Bits) Value
seq5788 143 1e-29
>seq5788
Length=1233
Score = 143 bits (158), Expect = 1e-29
Identities = 300/444 (68%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 56375 GTTATACCAGTCCACCCACGTTAGTGTGGCCAGTTCCACTTCTGCACGGTTTTTCCAGCT 56434
||| ||||||| |||||| | | || |||| || || || | ||||| |||||
Sbjct 707 GTTGTACCAGTGCACCCATCTCAAGGTCGCCATCTCAACAGCTTCGCGGTTCTTCCATGA 648
Query 56435 CTTACGGTGTATTACCTCCGCTTTGTAAAGACCATTGATGCTCTCAGCCATCGCGTTGTC 56494
| ||||||||| | ||| || ||||| || || ||||| ||||||||| ||||||||
Sbjct 647 TTGACGGTGTATCAGCTCAGCCTTGTACAGCCCGTTGATAGTCTCAGCCAAGGCGTTGTC 588
Query 56495 ATACGAGTCGCCTGTACTCCCTGTTGATGC--CAGTAATCCGGCTTCTTTTAGTCGCTCC 56552
|| |||||| | || || || | || || ||||| ||| || |||||
Sbjct 587 GTAGCTGTCGCCCTTGCTGCCAACCGAGGGTTCAATA--CCGGCCTCTGCCAGCCGCTCG 530
Query 56553 GTATAGGCCAGTGACACATACTGAGAGCCTTTATCGCTGTGATGGATG---------GTG 56603
|| ||| | || |||||||| ||| |||||||||||||| | |
Sbjct 529 GTGTAGCGAATCGAGACATACTGGCTGCCACGGTCGCTGTGATGGATCAGACCACCCGCG 470
Query 56604 CCAGACGGACGACGGGCCCACAACGCCTGCTCCAGCGCATCCAGCACGAATGTCGTT-TC 56662
| | ||| | ||||| ||| || |||||||| |||||||||||||| |||| | |
Sbjct 469 CAATGCGGCTGGCGGGCATACAGGGCTTGCTCCAGAGCATCCAGCACGAA-GTCGGTCTT 411
Query 56663 CATAGACGATGAGACCCGCCACCCCACGATGTATCCGGCAAACACATCAATGATAAACGC 56722
||| | ||| ||||| || ||||| | |||||||| ||||| | || ||
Sbjct 410 CATGCTGGTACTGACTCGCCAGCCAACGATCCGCCGCGCAAACACGTCAATCACGAAGGC 351
Query 56723 CACATAGACGAAGCCCTGCCATGTGCTGACGTAAGTAAAATCAGCCACCCACAGCTGGTC 56782
|||||| | |||||||||| || ||||| || || || | |||||||||||| |
Sbjct 350 CACATACAGCCAGCCCTGCCAGGTCGACACGTACGTGAAGTCCGACACCCACAGCTGATT 291
Query 56783 AGGTCGTTCTGCCACGAACTGACG 56806
|| || || || |||||| ||
Sbjct 290 TGGACGGTCGGCATGGAACTGGCG 267
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 200515896377577
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |