Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_005178.1
Length=37611
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 107 5e-19
>seq5790
Length=1233
Score = 107 bits (118), Expect = 5e-19
Identities = 137/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 14918 AGCCGCGACCCCAGCGCCATCCTGGTGGGAGGGTTCAATCGGGAGACAGGCGTCCTGGAC 14977
||||| ||||| |||||||||| | || ||| | | ||| ||| ||| |||||
Sbjct 957 AGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGAC 1016
Query 14978 GTGGTCGAGGCCGCCATCCGCAAGCGCCTGCCGGACAAGATCATCGAAGACATCATCGCC 15037
||||||||||| | |||||| || |||||||||| |||||||| || | ||||||
Sbjct 1017 GTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCG 1076
Query 15038 ATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTGAGGCGGTCCAGTTCCAGGAGTTC 15097
| ||||| | |||| || || ||||| ||| || ||||||||||||| |||
Sbjct 1077 CTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTC 1136
Query 15098 CTGCGCACC 15106
||| | |||
Sbjct 1137 CTGAGGACC 1145
Score = 104 bits (114), Expect = 6e-18
Identities = 174/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 14186 GAGGCGATCAAGGCGGAGCTGGAGTTCAATCCGCGCCT--GGCCATGGACTTCCCCCAGG 14243
||||| || ||||| |||||| ||| ||||| || || | ||| ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359
Query 14244 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14303
||||||||| || ||||||| | ||| || |||| | | | | | |
Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419
Query 14304 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14363
||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || |
Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479
Query 14364 ACCTGGTGGTCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14423
|||| || || ||||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539
Query 14424 ACAAGCTGGA 14433
|||| ||||
Sbjct 540 ACAAATTGGA 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 120222790323046
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |