Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_005178.1 Length=37611 Score E Sequences producing significant alignments: (Bits) Value seq5790 107 5e-19 >seq5790 Length=1233 Score = 107 bits (118), Expect = 5e-19 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 14918 AGCCGCGACCCCAGCGCCATCCTGGTGGGAGGGTTCAATCGGGAGACAGGCGTCCTGGAC 14977 ||||| ||||| |||||||||| | || ||| | | ||| ||| ||| ||||| Sbjct 957 AGCCGTGACCCATCCGCCATCCTGATCGGTGGGATGGACCGGCTGACCGGCAAGATGGAC 1016 Query 14978 GTGGTCGAGGCCGCCATCCGCAAGCGCCTGCCGGACAAGATCATCGAAGACATCATCGCC 15037 ||||||||||| | |||||| || |||||||||| |||||||| || | |||||| Sbjct 1017 GTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGACATGATCATCGCGGATACCATCGCG 1076 Query 15038 ATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGTTGAGGCGGTCCAGTTCCAGGAGTTC 15097 | ||||| | |||| || || ||||| ||| || ||||||||||||| ||| Sbjct 1077 CTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGTGGAAAGCATCCAGTTCCAGGAATTC 1136 Query 15098 CTGCGCACC 15106 ||| | ||| Sbjct 1137 CTGAGGACC 1145 Score = 104 bits (114), Expect = 6e-18 Identities = 174/250 (70%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 14186 GAGGCGATCAAGGCGGAGCTGGAGTTCAATCCGCGCCT--GGCCATGGACTTCCCCCAGG 14243 ||||| || ||||| |||||| ||| ||||| || || | ||| ||||| | | Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359 Query 14244 GCGCCGGCAAGGGCCGCGTCTGGCAAGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 14303 ||||||||| || ||||||| | ||| || |||| | | | | | | Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419 Query 14304 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 14363 ||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || | Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479 Query 14364 ACCTGGTGGTCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 14423 |||| || || ||||||||||||||||||||| |||||| ||||| ||||| | Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539 Query 14424 ACAAGCTGGA 14433 |||| |||| Sbjct 540 ACAAATTGGA 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120222790323046