Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_006150.1 Length=221454 Score E Sequences producing significant alignments: (Bits) Value seq23 161 1e-34 seq881 98.7 1e-15 >seq23 Length=7404865 Score = 161 bits (178), Expect = 1e-34 Identities = 170/224 (76%), Gaps = 0/224 (0%) Strand=Plus/Plus Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693 ||||| |||| || || ||| |||||| ||||| || |||| || ||||| |||||| Sbjct 3588189 GTCTGGAACAACTGCTCATCATCCCATTCCGGATGCTCCTGTTTAAGCACATCACACACT 3588248 Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753 |||||||| || | ||||| || || || |||||||| || |||||||||||||| || Sbjct 3588249 CTGTTGTGCTCTCGAAGCCAAATCGTGGCATACATCATCAGGCCAGGCACCAGGCCGAAC 3588308 Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813 |||| || || ||||| | |||| | ||| || || | || ||||||||||| | | Sbjct 3588309 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGGGGATAGATCATCTCC 3588368 Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857 ||||| ||||||||| | ||| ||||||| || || ||||| Sbjct 3588369 ACCTGAGAATCTTTGACTGTGGGAGGATACACCTCTCCATCAAT 3588412 Score = 87.8 bits (96), Expect = 3e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346 |||||||| || || | ||||| || || |||| || || | ||| |||| || | Sbjct 2331935 TCACCTTTCACACCCATGGGAGTCGGGCAGTCGTCAGCCACAGCAGGAAGAACTCTGGTA 2331994 Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406 |||||||||| ||| || || |||||||||||| ||| | | | | ||||| | Sbjct 2331995 TAATAGGAGATATTAGAAAAGGCTTCCCAGCTTTTGTAACCATGCTGTACATTGTAAGTT 2332054 Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439 || |||||||||||||||| ||||| ||||| Sbjct 2332055 GGCGGGCTGTCAATCAAATGTGATCTGGCTGAA 2332087 Score = 86.0 bits (94), Expect = 9e-12 Identities = 181/265 (68%), Gaps = 4/265 (2%) Strand=Plus/Plus Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381 ||||| | ||||| ||||| | |||| ||||| || | |||||| | || || | Sbjct 3587561 CTTACCCTCCCAGCAATTTGCCTGCTGAATGATTCAACAAACTGGGTCAGCCCATGTTCC 3587620 Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACTT-TGTTTTATCAATCTC 9440 || | ||| || |||||||| | || | |||| |||| || | | ||||| | Sbjct 3587621 ATTAATATCGAGTTGTTGTAGAGAAACTGCCGATAGTTGTACTCCTGATCT-TCAATTTG 3587679 Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500 ||| | || |||| || | ||||||||| || | | |||||||||| | | ||||| Sbjct 3587680 AAAGGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACG 3587739 Query 9501 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGT 9559 || ||||||||||| | | ||| ||||| || || | |||| || | ||||| Sbjct 3587740 GTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTAAAGT 3587798 Query 9560 GGTAGCCGCTGAGCTGCTGAACATA 9584 | ||||| || | ||||| ||||| Sbjct 3587799 GATAGCCACTCAAGTGCTGTACATA 3587823 >seq881 Length=711898 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812 || |||| || || || || ||||| | ||||| || | || || |||||| |||| Sbjct 86321 AAGCCCATCTCGCCACCAAATGTGCTCGACTTCCAATATTCTGGAGAACAGATGGGGTTC 86380 Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872 | | |||||| ||||||||||| |||| || | || | || ||||| || |||||| Sbjct 86381 CCTAAGAGGCCCTTGAGGGAAAAGGGAGATCCGATTTCTATCATACTCTCCCCAAAGATG 86440 Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932 | ||| ||| || ||| || | | | ||| | ||| ||||||| || ||||||||| Sbjct 86441 GAGTTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCAAGGCATCGATGTCT 86500 Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974 || || || | | || || || || ||||| |||||| Sbjct 86501 CCATAGAGCTCTTCCAACTCAGCTGCCATCTCCTTCTCTCCT 86542 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708457746984240