Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_006150.1
Length=221454
Score E
Sequences producing significant alignments: (Bits) Value
seq23 161 1e-34
seq881 98.7 1e-15
>seq23
Length=7404865
Score = 161 bits (178), Expect = 1e-34
Identities = 170/224 (76%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 9634 GTCTGAAACAGTTGTTCGTCACTCCATTCTGGATGTTCTCGTTTCAGAACATCGCACACT 9693
||||| |||| || || ||| |||||| ||||| || |||| || ||||| ||||||
Sbjct 3588189 GTCTGGAACAACTGCTCATCATCCCATTCCGGATGCTCCTGTTTAAGCACATCACACACT 3588248
Query 9694 CTGTTGTGTTCCCTGAGCCAGATAGTAGCGTACATCATGAGACCAGGCACCAGGCCAAAA 9753
|||||||| || | ||||| || || || |||||||| || |||||||||||||| ||
Sbjct 3588249 CTGTTGTGCTCTCGAAGCCAAATCGTGGCATACATCATCAGGCCAGGCACCAGGCCGAAC 3588308
Query 9754 GCCTCTTGACCGACAGCCAGACGCATATTTTCGGGCACTTCGGGAGGATAGATCATGTGC 9813
|||| || || ||||| | |||| | ||| || || | || ||||||||||| | |
Sbjct 3588309 ACCTCCTGCCCCACAGCAAACCGCAGGTGTTCAGGGACATGAGGGGGATAGATCATCTCC 3588368
Query 9814 ACCTGGACATCTTTGACCGAGGGGGGATACATTTCACCGTCAAT 9857
||||| ||||||||| | ||| ||||||| || || |||||
Sbjct 3588369 ACCTGAGAATCTTTGACTGTGGGAGGATACACCTCTCCATCAAT 3588412
Score = 87.8 bits (96), Expect = 3e-12
Identities = 111/153 (73%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 10287 TCACCTTTGACCCCAAGAGGAGTTGGACAATCGTGAGGAACCGGAGGTAGAATCCTTGCG 10346
|||||||| || || | ||||| || || |||| || || | ||| |||| || |
Sbjct 2331935 TCACCTTTCACACCCATGGGAGTCGGGCAGTCGTCAGCCACAGCAGGAAGAACTCTGGTA 2331994
Query 10347 TAATAGGAGAGATTGGAGAAAGCTTCCCAGCTTGGGTATTCGTAGTCCGCGTTGTAGATG 10406
|||||||||| ||| || || |||||||||||| ||| | | | | ||||| |
Sbjct 2331995 TAATAGGAGATATTAGAAAAGGCTTCCCAGCTTTTGTAACCATGCTGTACATTGTAAGTT 2332054
Query 10407 GGAGGGCTGTCAATCAAATCGGATCTACCTGAA 10439
|| |||||||||||||||| ||||| |||||
Sbjct 2332055 GGCGGGCTGTCAATCAAATGTGATCTGGCTGAA 2332087
Score = 86.0 bits (94), Expect = 9e-12
Identities = 181/265 (68%), Gaps = 4/265 (2%)
Strand=Plus/Plus
Query 9322 CTTACTCGGCCAGCTATTTGTTTCGTGAACGATTCTACTAGCTGGGTAATGCCGTGGGTC 9381
||||| | ||||| ||||| | |||| ||||| || | |||||| | || || |
Sbjct 3587561 CTTACCCTCCCAGCAATTTGCCTGCTGAATGATTCAACAAACTGGGTCAGCCCATGTTCC 3587620
Query 9382 ATGAGTATGGAATTGTTGTAAACGAAGTTAATGTAGTCATACTT-TGTTTTATCAATCTC 9440
|| | ||| || |||||||| | || | |||| |||| || | | ||||| |
Sbjct 3587621 ATTAATATCGAGTTGTTGTAGAGAAACTGCCGATAGTTGTACTCCTGATCT-TCAATTTG 3587679
Query 9441 AAACGCATCCGGCATGAGAGAATGCCAGTGATACAACATGTTAAACTCGGAAAATATACG 9500
||| | || |||| || | ||||||||| || | | |||||||||| | | |||||
Sbjct 3587680 AAAGGTGTCAGGCAGAAGGGGATGCCAGTGGTAGAGCGTGTTAAACTCAGCAGCAATACG 3587739
Query 9501 ATTTTGGTACTGGAA-CGAAGTACCAAAGAGCAGTTCGGGCTTAAACAGCAACTGAAAGT 9559
|| ||||||||||| | | ||| ||||| || || | |||| || | |||||
Sbjct 3587740 GTTCTGGTACTGGAATTGTTGGTTGAAA-AGCAGCTCTGGGTCAAACTTCAGTTTAAAGT 3587798
Query 9560 GGTAGCCGCTGAGCTGCTGAACATA 9584
| ||||| || | ||||| |||||
Sbjct 3587799 GATAGCCACTCAAGTGCTGTACATA 3587823
>seq881
Length=711898
Score = 98.7 bits (108), Expect = 1e-15
Identities = 155/222 (70%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 8753 AACCCCACGTCTCCGCCGAAGGTGCTGGGTTTCCAGTAACCCGGGGAGCAGATGACGTTC 8812
|| |||| || || || || ||||| | ||||| || | || || |||||| ||||
Sbjct 86321 AAGCCCATCTCGCCACCAAATGTGCTCGACTTCCAATATTCTGGAGAACAGATGGGGTTC 86380
Query 8813 GCCATGAGGCCTTTGAGGGAAAACGGAGCCCCCAGCTCGAGAATGCTCTCACCGAAGATG 8872
| | |||||| ||||||||||| |||| || | || | || ||||| || ||||||
Sbjct 86381 CCTAAGAGGCCCTTGAGGGAAAAGGGAGATCCGATTTCTATCATACTCTCCCCAAAGATG 86440
Query 8873 GCGTTGGGACGGGGCTTTTCCACCAAGAATCCGGTGTACAACTCCACAGCCTCGATGTCT 8932
| ||| ||| || ||| || | | | ||| | ||| ||||||| || |||||||||
Sbjct 86441 GAGTTTGGATGGCACTTCTCAAGAAGCAGTCCCGGGTAGAACTCCAAGGCATCGATGTCT 86500
Query 8933 CCGTAAAGGGCCCTGAGTTCGGCAGCGATTTCCTTTTCTCCT 8974
|| || || | | || || || || ||||| ||||||
Sbjct 86501 CCATAGAGCTCTTCCAACTCAGCTGCCATCTCCTTCTCTCCT 86542
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 708457746984240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |