Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 107 2e-18
seq717 105 6e-18
seq808 98.7 9e-16
seq265 96.9 3e-15
seq298 93.3 4e-14
seq920 87.8 2e-12
seq45 87.8 2e-12
seq331 84.2 2e-11
seq647 82.4 7e-11
>seq5307
Length=1324
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || || | ||||||||| | ||| || || || || | ||||| ||
Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||||||||||||||| || |||| || | | ||||| || || ||
Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | ||||| || ||| | | | ||||||| | | |||||
Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| |||||||| || || || || || |||||||||||||||||
Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 105 bits (116), Expect = 6e-18
Identities = 157/223 (70%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 94785 CTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAG 94844
||| || || | ||||||||||| ||| || || || || | ||| | || | ||
Sbjct 563447 CTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAG 563506
Query 94845 TGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATAC 94904
|| | ||||||||||||||| || |||| || | ||||| || || || || |
Sbjct 563507 TGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGC 563566
Query 94905 CTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAA 94964
| || ||||| | ||||| || ||||| | | ||||||| | | ||||| ||||
Sbjct 563567 CCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAA 563626
Query 94965 TCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||||||| || || || || || |||||||||||||||||
Sbjct 563627 GTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq808
Length=762264
Score = 98.7 bits (108), Expect = 9e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| |||||| | || | ||| || |||||||| | ||| || || || | |
Sbjct 448027 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCC 447968
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| ||||| || || || ||||||| | |||||||||||| |||||||| ||||| ||
Sbjct 447967 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 447908
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || || ||||| || | | || || | | | || || || | |||||
Sbjct 447907 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGAT 447848
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
||| || |||||||| ||||||| || |||||||| ||
Sbjct 447847 GGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCATCCT 447809
>seq265
Length=2261556
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| |||||| | || | ||| || |||||||| | ||| || || || |||
Sbjct 841131 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 841072
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| ||||| || || || ||||||| |||||||||||| |||||||| ||||| ||
Sbjct 841071 ATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 841012
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || || ||||| || | | || || | | | || || || | |||||
Sbjct 841011 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 840952
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || || ||||| |||||||| || ||||||||
Sbjct 840951 GGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916
>seq298
Length=2265018
Score = 93.3 bits (102), Expect = 4e-14
Identities = 158/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|| |||| || || | ||||||||||| ||| || || || || | || || ||
Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG-- 584656
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| |||| | ||||||||||||||| || |||| || | | ||||| || || ||
Sbjct 584657 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| || || ||||| | | ||| || ||||| | | ||||||| | | |||||
Sbjct 584717 ATGCCCTCCTTGTCTTGGA-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| |||||||| || || || || || ||||||||| |||||||
Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq920
Length=534542
Score = 87.8 bits (96), Expect = 2e-12
Identities = 151/217 (70%), Gaps = 2/217 (1%)
Strand=Plus/Plus
Query 94792 TCGCAACACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG 94850
|| |||| ||||| || | ||| | |||||||| | ||| || || || |||
Sbjct 150015 TCTCAAC-CCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTC 150073
Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910
||| ||||| || || || ||||||| | |||||||||||| |||||||| ||||| |
Sbjct 150074 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 150133
Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970
| | | || || ||||| || | || || | | | || || | | ||||
Sbjct 150134 TATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGA 150193
Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|||| || |||||||| |||||||| || ||||||||
Sbjct 150194 TGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 150230
>seq45
Length=5545317
Score = 87.8 bits (96), Expect = 2e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857
||||||||||| ||| || || || || | ||||| || | ||||| ||||||
Sbjct 1737689 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTC 1737748
Query 94858 CAGCTGTTTTCCGC-CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916
|||||||| || | |||| || | || ||||| || || || || || || ||||| |
Sbjct 1737749 CAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTT 1737808
Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976
||||| || ||||| | ||||||| | | ||| || | |||||||| |
Sbjct 1737809 GGATTTTAGCTTTGACATTCTCAGTGGTGTCAG---GCTTGACCTCGAGTGTGATGGTCT 1737865
Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || || |||||||| ||||||||
Sbjct 1737866 TGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq331
Length=2147541
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851
|| |||||| | || | ||| || |||||||| | ||| || || || |||
Sbjct 851457 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 851398
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| ||||| || || || ||||||| |||||||||||| |||||||| ||||| ||
Sbjct 851397 ATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 851338
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | || || ||||| || | | || || | | | || | | | |||||
Sbjct 851337 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGAT 851278
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || || |||| |||||||| || ||||||||
Sbjct 851277 GGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242
>seq647
Length=1105866
Score = 82.4 bits (90), Expect = 7e-11
Identities = 137/198 (69%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869
||| || |||||||| | ||| || || || |||| ||| ||||| || || ||
Sbjct 850248 AGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCC 850189
Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929
|||||| | |||||||||||| |||||||| ||||| || || | || || ||||
Sbjct 850188 AGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTT 850129
Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989
|| | | || || | | | || | |||| |||| ||| || |||||||| ||
Sbjct 850128 TACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGT 850069
Query 94990 TTTCACAAAGATCTGCAT 95007
|| || || ||||||||
Sbjct 850068 TTCCATGAAAATCTGCAT 850051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448248774841560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |