Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq5307 107 2e-18 seq717 105 6e-18 seq808 98.7 9e-16 seq265 96.9 3e-15 seq298 93.3 4e-14 seq920 87.8 2e-12 seq45 87.8 2e-12 seq331 84.2 2e-11 seq647 82.4 7e-11 >seq5307 Length=1324 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || | ||||||||| | ||| || || || || | ||||| || Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||||||||||||||| || |||| || | | ||||| || || || Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | ||||| || ||| | | | ||||||| | | ||||| Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| |||||||| || || || || || ||||||||||||||||| Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq717 Length=839118 Score = 105 bits (116), Expect = 6e-18 Identities = 157/223 (70%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 94785 CTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAG 94844 ||| || || | ||||||||||| ||| || || || || | ||| | || | || Sbjct 563447 CTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAG 563506 Query 94845 TGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATAC 94904 || | ||||||||||||||| || |||| || | ||||| || || || || | Sbjct 563507 TGCGGCCATCCTCCAGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGC 563566 Query 94905 CTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAA 94964 | || ||||| | ||||| || ||||| | | ||||||| | | ||||| |||| Sbjct 563567 CCTCCTTGTCTTGGATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAA 563626 Query 94965 TCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||||||| || || || || || ||||||||||||||||| Sbjct 563627 GTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq808 Length=762264 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| || |||||||| | ||| || || || | | Sbjct 448027 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCC 447968 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| || || || ||||||| | |||||||||||| |||||||| ||||| || Sbjct 447967 ATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 447908 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | | || || | | | || || || | ||||| Sbjct 447907 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGAT 447848 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||| || |||||||| ||||||| || |||||||| || Sbjct 447847 GGTCTTCCCAGTAAGGGTTTTCATGAAAATCTGCATCCT 447809 >seq265 Length=2261556 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| || |||||||| | ||| || || || ||| Sbjct 841131 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 841072 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| || || || ||||||| |||||||||||| |||||||| ||||| || Sbjct 841071 ATCTTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 841012 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | | || || | | | || || || | ||||| Sbjct 841011 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGAT 840952 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || ||||| |||||||| || |||||||| Sbjct 840951 GGTCTTCCCGGTAAGGGTTTTCACGAAAATCTGCAT 840916 >seq298 Length=2265018 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || | ||||||||||| ||| || || || || | || || || Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAG-- 584656 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | |||| | ||||||||||||||| || |||| || | | ||||| || || || Sbjct 584657 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || || ||||| | | ||| || ||||| | | ||||||| | | ||||| Sbjct 584717 ATGCCCTCCTTGTCTTGGA-TTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| |||||||| || || || || || ||||||||| ||||||| Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq920 Length=534542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 94792 TCGCAACACCAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG 94850 || |||| ||||| || | ||| | |||||||| | ||| || || || ||| Sbjct 150015 TCTCAAC-CCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTC 150073 Query 94851 AATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| ||||| || || || ||||||| | |||||||||||| |||||||| ||||| | Sbjct 150074 CATCTTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCT 150133 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 | | | || || ||||| || | || || | | | || || | | |||| Sbjct 150134 TATTCTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGA 150193 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || |||||||| |||||||| || |||||||| Sbjct 150194 TGGTCTTCCCAGTAAGGGTTTTCACGAAAATCTGCAT 150230 >seq45 Length=5545317 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||||| ||| || || || || | ||||| || | ||||| |||||| Sbjct 1737689 CACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTC 1737748 Query 94858 CAGCTGTTTTCCGC-CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCAT 94916 |||||||| || | |||| || | || ||||| || || || || || || ||||| | Sbjct 1737749 CAGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTT 1737808 Query 94917 AAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTT 94976 ||||| || ||||| | ||||||| | | ||| || | |||||||| | Sbjct 1737809 GGATTTTAGCTTTGACATTCTCAGTGGTGTCAG---GCTTGACCTCGAGTGTGATGGTCT 1737865 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || || || || |||||||| |||||||| Sbjct 1737866 TGCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896 >seq331 Length=2147541 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | ||| || |||||||| | ||| || || || ||| Sbjct 851457 TCTCAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCC 851398 Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911 ||| ||||| || || || ||||||| |||||||||||| |||||||| ||||| || Sbjct 851397 ATCTTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTT 851338 Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971 || | || || ||||| || | | || || | | | || | | | ||||| Sbjct 851337 ATCCTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGAT 851278 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||| || || |||| |||||||| || |||||||| Sbjct 851277 GGTCTTCCCGGTAAAGGTTTTCACGAAAATCTGCAT 851242 >seq647 Length=1105866 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869 ||| || |||||||| | ||| || || || |||| ||| ||||| || || || Sbjct 850248 AGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTGCGTCCATCTTCCAGTTGCTTGCC 850189 Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929 |||||| | |||||||||||| |||||||| ||||| || || | || || |||| Sbjct 850188 AGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATCCTGGATCTTGACCTT 850129 Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989 || | | || || | | | || | |||| |||| ||| || |||||||| || Sbjct 850128 TACATTTTCTATTGTATCTGAGGGTTCAGCCTCAAGAGTGACGGTCTTCCCAGTAAGCGT 850069 Query 94990 TTTCACAAAGATCTGCAT 95007 || || || |||||||| Sbjct 850068 TTCCATGAAAATCTGCAT 850051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448248774841560