Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq636 95.1 3e-14
seq927 86.0 2e-11
>seq636
Length=1077480
Score = 95.1 bits (104), Expect = 3e-14
Identities = 105/140 (75%), Gaps = 0/140 (0%)
Strand=Plus/Plus
Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170
|| ||| |||| |||| ||||||||| || || |||| |||||||| || || || |||
Sbjct 900470 GCCCAGCAGCTTTGGTATGCCATCATTGAGTCTCAGACAGAGACAGGTACCCCATACATG 900529
Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230
| ||||||||||| || ||||| || |||||||||| |||| || || || |
Sbjct 900530 CTCTACAAAGATTCCTGTAACCGGAAAAGCAACCAGCAGAACCTGGGAACGATCAAATGC 900589
Query 364231 AGCAACCTATGTACCGAGAT 364250
|||||||| || || || ||
Sbjct 900590 AGCAACCTGTGCACAGAAAT 900609
Score = 84.2 bits (92), Expect = 6e-11
Identities = 134/191 (70%), Gaps = 6/191 (3%)
Strand=Plus/Plus
Query 364951 CAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATT 365010
|||| ||| |||| | ||||||| || ||||||| |||| || || |||||||||||
Sbjct 921613 CAGAGCATACCAGAAATTCCAGATGACCTGAAGCAACTTTATAAGACTGTATGGGAAATC 921672
Query 365011 TCCATGCGAAC---TCTCATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGC 365067
|| | ||| ||||| | ||||| || || | |||||||| || ||| |||
Sbjct 921673 TCTCAGAAAACCATTCTCA---AGATGGCAGCTGAGAGAGGTGCTTTCATTGATCAAAGC 921729
Query 365068 CAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTC 365127
||||| || ||| | ||| || |||| | || | ||| || || ||||| |||
Sbjct 921730 CAGTCTTTGAACATCCACATTGCTGAGCCTAACTATGGCAAACTCACTAGTATGCACTTC 921789
Query 365128 TACGGGTGGAA 365138
||||| |||||
Sbjct 921790 TACGGCTGGAA 921800
>seq927
Length=612318
Score = 86.0 bits (94), Expect = 2e-11
Identities = 332/519 (64%), Gaps = 6/519 (1%)
Strand=Plus/Minus
Query 22435 AAGAATAAGGCAGATTGGGCGCTGAAATGGAT---GAACAATGAACGTTCATTCGCGGAA 22491
||||| |||||||||||||| || ||||| | |||| || | | | | |||
Sbjct 154125 AAGAAGAAGGCAGATTGGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTATGGAGAA 154066
Query 22492 CGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATC 22551
||| || | || ||||| | || ||||| || ||||||||||| | ||| | ||
Sbjct 154065 CGTGTTGTAGCTTTTGCCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATA 154006
Query 22552 TTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGC 22611
|| ||||| || ||| | | | | ||| | || || || ||||| || || | ||||||
Sbjct 154005 TTCTGGCTCAAGAAATGAGGACTGATGTCTGGCCTCACATTTTCCAACGAACTTATTAGC 153946
Query 22612 CGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCAT 22671
||||||||||| | || || ||||| || || | | || || || | || ||
Sbjct 153945 AGAGATGAGGGTTTACACTGTGACTTTGCCTGCCTGATGT-TC--AAACACCTGATACAC 153889
Query 22672 AAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTA 22731
|||| | | | | | || || || ||| ||||| || | ||||
Sbjct 153888 AAACCTTCGGAGCAGAAAGTCAAAGAAATAATTGTCAATGCTGTAAGGATAGAACAGGAG 153829
Query 22732 TTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACA 22791
|| | ||||| || || || | |||||||| || ||| | | |||||
Sbjct 153828 TTCCTCACAGAGGCATTGCCGGTGAAGCTCATTGGGATGAATTGCACTTTAATGAAGCAG 153769
Query 22792 TATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAAC 22851
| ||| ||||||| ||||| | || | | || |||| | ||| || |
Sbjct 153768 TGCATTGAATTTGTGGCAGACAGACTTATGCTGGAGCTGGGTTTTAGCAAGATTTTCAGA 153709
Query 22852 GTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTC 22911
|| | || |||||||| | ||||| ||||||||| ||||| ||||| || |||||
Sbjct 153708 GTAGAAAACCCATTTGACTTCATGGAGAATATTTCACTGGAAGGGAAGACTAACTTCTTT 153649
Query 22912 GAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950
|| || ||||| || || || || | | ||| || |||
Sbjct 153648 GAGAAGAGAGTAGGAGAGTATCAGAGAATAGGAGTGATG 153610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303227170220522
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |