Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq265 111 1e-19
seq808 109 4e-19
seq331 105 4e-18
seq920 96.9 2e-15
seq376 86.0 4e-12
>seq265
Length=2261556
Score = 111 bits (122), Expect = 1e-19
Identities = 154/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| |||| | ||
Sbjct 841128 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 841069
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || | | ||| ||||| | || | ||||| || ||
Sbjct 841068 TTCCAGTTGCTTGCCAGCAAAGATCGGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 841009
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 841008 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCGAGGGTGATGGT 840949
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 840948 CTTCCCGGTAAGGGTTTTCACGAAAATCTGCATCTT 840913
>seq808
Length=762264
Score = 109 bits (120), Expect = 4e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| |||||||| | | || | ||
Sbjct 448024 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAGATATGTCCATC 447965
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || ||
Sbjct 447964 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 447905
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | |||||| |||||| || | || || ||
Sbjct 447904 CTGGATCTTGGCCTTTACATTTTCTATTGTATCTGAGGGTTCAACCTCGAGGGTGATGGT 447845
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || || | |||||||| ||| ||||||||
Sbjct 447844 CTTCCCAGTAAGGGTTTTCATGAAAATCTGCAT 447812
>seq331
Length=2147541
Score = 105 bits (116), Expect = 4e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| |||| | ||
Sbjct 851454 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 851395
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || | | ||| ||||| | || | ||||| || ||
Sbjct 851394 TTCCAGTTGCTTGCCAGCAAAGATCTGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 851335
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | | ||||| |||| | | | || || ||
Sbjct 851334 CTGGATCTTGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAGCCTTGAGGGTGATGGT 851275
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || |||||||||||||| |||||||| ||
Sbjct 851274 CTTCCCGGTAAAGGTTTTCACGAAAATCTGCATCTT 851239
>seq920
Length=534542
Score = 96.9 bits (106), Expect = 2e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||| | | |||||||||| |||||||||||| ||||| ||||||||| |||| | ||
Sbjct 150018 CAACCCAAGATGAAGAGTGAACTCCTTTTGAATGTTGTAGTCAGACAAAGTACGTCCATC 150077
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || ||||| || || | ||| ||||| | || | ||||| || |
Sbjct 150078 TTCCAGTTGCTTGCCAGCAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATT 150137
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| || || ||| ||||| | ||||| |||||| | | || || ||
Sbjct 150138 CTGGATCTTGGCCTTTACATTTTCTTTTGTATCCGAGGGTTCAACCTTGAGGGTGATGGT 150197
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| || || | |||||||||||| |||||||| ||
Sbjct 150198 CTTCCCAGTAAGGGTTTTCACGAAAATCTGCATCTT 150233
>seq376
Length=1527771
Score = 86.0 bits (94), Expect = 4e-12
Identities = 145/211 (69%), Gaps = 7/211 (3%)
Strand=Plus/Minus
Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164
|||||| | |||||||||| |||||||||||| ||||| ||||||||| | || | ||
Sbjct 1196495 CAACACAAGATGAAGAGTGGACTCCTTTTGAATGTTGTAGTCAGACAAAGTATGTCCATC 1196436
Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224
|| | ||| || || | ||| || || | ||| ||||| | || | ||||| || ||
Sbjct 1196435 TTCCAGTTGCTTGCCAGTAAAGATCAGTCTTTGCTGATCAGGAGGAATTCCTTCCTTATC 1196376
Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284
| | ||| ||||| | | ||||| |||||| || | || || ||
Sbjct 1196375 C-------TGGCCTTTACATTTTCTATTGTATCCGAGGGTTCAACCTCCAGGGTGATGGT 1196323
Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGC 38315
|| || || | ||| |||||||| ||||||
Sbjct 1196322 CTTCCCAGTAAGGGTCTTCACGAAAATCTGC 1196292
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334916293898501
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |