Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq927 269 3e-67 seq138 102 9e-17 >seq927 Length=612318 Score = 269 bits (298), Expect = 3e-67 Identities = 431/615 (70%), Gaps = 3/615 (0%) Strand=Plus/Plus Query 93062 GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCT 93121 ||||| |||| | | ||| |||| | ||| |||||||| |||||||| || ||| Sbjct 153884 GGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCT 153943 Query 93122 CGTGATATCAACT-CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCA 93180 | || || || | | ||| ||||| | || | | |||||||| |||||||||||| Sbjct 153944 C-TGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCAGTCCTCATTTCTTGAGCCA 154002 Query 93181 AAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAAT 93240 ||||| || |||||| ||||||||| || || |||||||| || ||||| || |||| Sbjct 154003 GAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCTACAAC 154062 Query 93241 ACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300 |||||| || | | || || | ||||| || |||||||| || || || Sbjct 154063 ACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAATCTGCCTTCTT 154122 Query 93301 CTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCG 93360 ||| | |||||| | ||| || || ||||| || || | || | || | |||||| Sbjct 154123 CTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACTCCCTTTCCTTGGAATCTTT 154182 Query 93361 TATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTG 93420 || || || || | | ||| |||||| |||||||| || ||||| |||||||| Sbjct 154183 AATATACGTGTCATTGAGGAGACTATACATCTCAGAATGTTTGTT-TCCATGGCAATTTG 154241 Query 93421 GAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAG 93480 ||| || |||||||| | ||||| || ||||| | |||||| ||| | ||| || | Sbjct 154242 GAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTTGGCTAAACCGCTCCACCAA 154301 Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540 |||||||||||||| ||||| || ||||| ||||| | | ||| |||||||| Sbjct 154302 GTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAAGAACATGGGATATAAAATA 154361 Query 93541 TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600 | |||||||| || || ||||| | || || || || ||||| ||||| || Sbjct 154362 TCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCTTGGAGAGATCCACTTCCTC 154421 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660 | |||||||| || || || ||||| || ||||| | ||| || || || |||| || Sbjct 154422 AGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCCAAATATCATGGTATTCGAT 154481 Query 93661 TGGAAATATGACAAA 93675 ||||| | |||||| Sbjct 154482 AGGAAAGACGACAAA 154496 >seq138 Length=3455650 Score = 102 bits (112), Expect = 9e-17 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202 ||||| | || || | ||||||||||||||||||||| ||||| || |||||| ||| Sbjct 2542819 AATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCG 2542878 Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246 ||||| || || |||||||| || ||||| ||||||| |||||| Sbjct 2542879 GAAAAGAAGATTCCTTCCACTGCGGCAAAAGCCACAACACGTTC 2542922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556808100086040