Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq927 269 3e-67
seq138 102 9e-17
>seq927
Length=612318
Score = 269 bits (298), Expect = 3e-67
Identities = 431/615 (70%), Gaps = 3/615 (0%)
Strand=Plus/Plus
Query 93062 GGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCT 93121
||||| |||| | | ||| |||| | ||| |||||||| |||||||| || |||
Sbjct 153884 GGTTTGTGTATCAGGTGTTTGAACATCAGGCAGGCAAAGTCACAGTGTAAACCCTCATCT 153943
Query 93122 CGTGATATCAACT-CATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCA 93180
| || || || | | ||| ||||| | || | | |||||||| ||||||||||||
Sbjct 153944 C-TGCTAATAAGTTCGTTGGAAAATGTGAGGCCAGACATCAGTCCTCATTTCTTGAGCCA 154002
Query 93181 AAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAAT 93240
||||| || |||||| ||||||||| || || |||||||| || ||||| || ||||
Sbjct 154003 GAATATCGATGCAAAAGAACCAGAAAAGAAGATTCCTTCCACTGCGGCAAAAGCTACAAC 154062
Query 93241 ACGTTCGGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTT 93300
|||||| || | | || || | ||||| || |||||||| || || ||
Sbjct 154063 ACGTTCTCCATAGGTAGCCTCTTTGTCCCCAATCCAACGCAAGGCCCAATCTGCCTTCTT 154122
Query 93301 CTTAATACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCG 93360
||| | |||||| | ||| || || ||||| || || | || | || | ||||||
Sbjct 154123 CTTGACACAAGGCATTGTCTCAATGGCGTTGAAGAGACACTCCCTTTCCTTGGAATCTTT 154182
Query 93361 TATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTG 93420
|| || || || | | ||| |||||| |||||||| || ||||| ||||||||
Sbjct 154183 AATATACGTGTCATTGAGGAGACTATACATCTCAGAATGTTTGTT-TCCATGGCAATTTG 154241
Query 93421 GAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAG 93480
||| || |||||||| | ||||| || ||||| | |||||| ||| | ||| || |
Sbjct 154242 GAAGCCATAGAAACAGCGGGCTTCTGTAATCTGAATTTCTTGGCTAAACCGCTCCACCAA 154301
Query 93481 ATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATG 93540
|||||||||||||| ||||| || ||||| ||||| | | ||| ||||||||
Sbjct 154302 GTTTTCATTGACTATGCCATCACTCGCAGCAAAGAAAGCAAGAACATGGGATATAAAATA 154361
Query 93541 TTTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTC 93600
| |||||||| || || ||||| | || || || || ||||| ||||| ||
Sbjct 154362 TCTCTCATCAGGCTTCAGGGCTTCCCAGTGCTGGAGGTCCTTGGAGAGATCCACTTCCTC 154421
Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660
| |||||||| || || || ||||| || ||||| | ||| || || || |||| ||
Sbjct 154422 AGCTGTCCAAAAGGAAGCCTCCGCTTTCTTATACATCTGCCAAATATCATGGTATTCGAT 154481
Query 93661 TGGAAATATGACAAA 93675
||||| | ||||||
Sbjct 154482 AGGAAAGACGACAAA 154496
>seq138
Length=3455650
Score = 102 bits (112), Expect = 9e-17
Identities = 85/104 (82%), Gaps = 0/104 (0%)
Strand=Plus/Plus
Query 93143 AATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCA 93202
||||| | || || | ||||||||||||||||||||| ||||| || |||||| |||
Sbjct 2542819 AATGTGAGGCCAGGCATCAGTCCTCGTTTCTTGAGCCAGAATATCGATGCAAAAGAACCG 2542878
Query 93203 GaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTC 93246
||||| || || |||||||| || ||||| ||||||| ||||||
Sbjct 2542879 GAAAAGAAGATTCCTTCCACTGCGGCAAAAGCCACAACACGTTC 2542922
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556808100086040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |