Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 127 2e-24
seq717 116 3e-21
seq298 102 7e-17
seq265 98.7 8e-16
seq331 96.9 3e-15
seq647 95.1 1e-14
seq56 93.3 4e-14
seq808 89.7 4e-13
seq45 86.0 5e-12
seq304 82.4 6e-11
>seq5307
Length=1324
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 727 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCA 786
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| || | || || |||| ||||| |||||||||||||| || ||||| || |
Sbjct 787 GTGACACTATTGAGAATGCCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 846
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| || ||||| ||||||||| | |||||| |||||| |||| || || |
Sbjct 847 AGCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATA 906
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || || ||||| ||||| |||| || || | || |||| || |||
Sbjct 907 ATATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGGT 956
>seq717
Length=839118
Score = 116 bits (128), Expect = 3e-21
Identities = 145/199 (73%), Gaps = 0/199 (0%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| || ||||| || || | || || || || |||| ||||| || || |||
Sbjct 563671 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCA 563612
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| || | || || ||||| ||||| |||||||||||||| || ||||| || |
Sbjct 563611 GTGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 563552
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || | ||| || ||||| ||||||||| | |||||| |||||| |||| || | |
Sbjct 563551 AGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTA 563492
Query 22397 ACATTCAAAAAGAATCCAC 22415
| || || ||||| |||||
Sbjct 563491 ATATCCAGAAAGAGTCCAC 563473
>seq298
Length=2265018
Score = 102 bits (112), Expect = 7e-17
Identities = 162/230 (70%), Gaps = 3/230 (1%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| | ||||| || || | || || || || |||| | ||| || || |||
Sbjct 584824 AGATGCAGACCTTTGTGAAGACCCTGACGGGCAAGACCATCACACCTGAGGTCGAGCCCA 584765
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
|| || | || || ||||| ||| | |||||||||||||| || ||||| || |
Sbjct 584764 GTGACACTATTGAGAATGTCAAAGCTAAA-TCCAAGACAAGGAGGGCATCCCACCTGACC 584706
Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396
| || ||||| || |||| ||||||||| | |||||| |||||| |||| || || |
Sbjct 584705 AGCAGCGTCTGATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCAC--TCTCTGACTAGA 584648
Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| || || ||||| ||||| | || || || | || |||| || |||
Sbjct 584647 ATATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGAGGTGGT 584598
>seq265
Length=2261556
Score = 98.7 bits (108), Expect = 8e-16
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || ||||| | ||||| || || |||| || || || ||| ||
Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || || ||||| || ||||| || |||
Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||| | | || ||||| ||||| || | || ||| || || | || || |||
Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434
||||||||||| || ||||| | ||| | || ||| ||
Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 841131
>seq331
Length=2147541
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/231 (69%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || ||||| || ||||| || || |||| || | | ||| ||
Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || || ||||| || ||||| || |||
Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||| | | || ||||| ||||| || | || ||| || || | || || |||
Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||||| || ||||| | ||| | || ||| || | || || |||
Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 851469
>seq647
Length=1105866
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| | |||| | || || || || ||||||||||| | ||| ||
Sbjct 850048 AAGATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCC 850107
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
| ||||| | || || | || || || || || ||||| || ||||| || |||
Sbjct 850108 TCAGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 850167
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| ||| | || || ||| | ||||| || | || ||| ||||| | || || |||
Sbjct 850168 CAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 850227
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||||||||| || |||||
Sbjct 850228 AACATTCAAAAGGAGTCCAC 850247
>seq56
Length=5443799
Score = 93.3 bits (102), Expect = 4e-14
Identities = 149/214 (70%), Gaps = 10/214 (5%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
|||||| || ||||| || ||| | || || || || |||| || || || || |||
Sbjct 2722716 AGATGCGGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACACTGGAGGTTGAGCCCA 2722657
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC---CG 22333
|| ||| |||| || | ||| ||||| |||||||||||||| |||||||| |
Sbjct 2722656 GTGACACCATGGAGAATGTTAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACC 2722597
Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393
| || || | ||| || ||||| ||||||||| | |||||| | |||| || |
Sbjct 2722596 AGCAGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATATC-------TCTCAGACT 2722544
Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGT 22427
| || || | ||||| |||||| | || || ||
Sbjct 2722543 ATAATATCTAGAAAGAGTCCACCCTGCACTTGGT 2722510
>seq808
Length=762264
Score = 89.7 bits (98), Expect = 4e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
|||||| ||||| | ||||| | || || || || |||| || || || ||| || |
Sbjct 447811 GATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 447870
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
||||| | || || | || || || || || ||||| || ||||| || |||||
Sbjct 447871 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 447930
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||| | || || ||||| ||||| || | || ||| | | | | || || |||||
Sbjct 447931 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAA 447990
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||||||| || ||||| | ||| | || ||| || | || || |||
Sbjct 447991 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 448039
>seq45
Length=5545317
Score = 86.0 bits (94), Expect = 5e-12
Identities = 141/200 (71%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276
||||||| |||||||| || || | || || || || |||| || || || || |
Sbjct 1737898 AGATGCAGATTTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTC--AAGC- 1737842
Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336
| || ||| || || ||||| ||||| |||||||||||||| || ||||| || |
Sbjct 1737841 CTGACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 1737782
Query 22337 AACAACGTCTTATATTTG-CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
| || |||| || |||| ||| ||||| | |||||| | ||| |||| || ||
Sbjct 1737781 AGCAGAGTCTGATTTTTGTGGGGCCAACAGCTGGAGGATGGTCACACTCTCTCAGACTAT 1737722
Query 22396 AACATTCAAAAAGAATCCAC 22415
|| || || ||||| |||||
Sbjct 1737721 AATATCCAGAAAGAGTCCAC 1737702
>seq304
Length=2338375
Score = 82.4 bits (90), Expect = 6e-11
Identities = 92/122 (75%), Gaps = 2/122 (2%)
Strand=Plus/Plus
Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354
||||| ||||| |||||||||||||| || ||| | || || || ||||| || ||||
Sbjct 1425140 TCAAAGCTAAAATACAAGACAAGGAGGGCATCCCATCTGACCAGCAGCGTCTGATTTTTG 1425199
Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414
| ||||||||| | || ||| | |||| |||| || || || || || ||||| | ||
Sbjct 1425200 CAGGCAAACAGCTGGAAGATGGCAGCAC--TCTCGGACTATAATATCCATAAAGAGTGCA 1425257
Query 22415 CC 22416
||
Sbjct 1425258 CC 1425259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419689271041615
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |