Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq5307 127 2e-24 seq717 116 3e-21 seq298 102 7e-17 seq265 98.7 8e-16 seq331 96.9 3e-15 seq647 95.1 1e-14 seq56 93.3 4e-14 seq808 89.7 4e-13 seq45 86.0 5e-12 seq304 82.4 6e-11 >seq5307 Length=1324 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 727 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCA 786 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || || | || || |||| ||||| |||||||||||||| || ||||| || | Sbjct 787 GTGACACTATTGAGAATGCCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 846 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || ||||| ||||||||| | |||||| |||||| |||| || || | Sbjct 847 AGCAGCGTCTGATTTTTGCGGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTATA 906 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | || || ||||| ||||| |||| || || | || |||| || ||| Sbjct 907 ATATCCAGAAAGAGTCCACTCTACACTTGGTGCTTCGTCTGCGAGGTGGT 956 >seq717 Length=839118 Score = 116 bits (128), Expect = 3e-21 Identities = 145/199 (73%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| || ||||| || || | || || || || |||| ||||| || || ||| Sbjct 563671 AGATGCAGATCTTTGTGAAGACCCTGACGGGCAAGACCATCACACTTGAGGTCGAGCCCA 563612 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || || | || || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 563611 GTGACACTATTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 563552 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || | ||| || ||||| ||||||||| | |||||| |||||| |||| || | | Sbjct 563551 AGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATGGCCGCACTCTCTCAGACTGTA 563492 Query 22397 ACATTCAAAAAGAATCCAC 22415 | || || ||||| ||||| Sbjct 563491 ATATCCAGAAAGAGTCCAC 563473 >seq298 Length=2265018 Score = 102 bits (112), Expect = 7e-17 Identities = 162/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| | ||||| || || | || || || || |||| | ||| || || ||| Sbjct 584824 AGATGCAGACCTTTGTGAAGACCCTGACGGGCAAGACCATCACACCTGAGGTCGAGCCCA 584765 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 || || | || || ||||| ||| | |||||||||||||| || ||||| || | Sbjct 584764 GTGACACTATTGAGAATGTCAAAGCTAAA-TCCAAGACAAGGAGGGCATCCCACCTGACC 584706 Query 22337 AACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACA 22396 | || ||||| || |||| ||||||||| | |||||| |||||| |||| || || | Sbjct 584705 AGCAGCGTCTGATTTTTGTGGGCAAACAGCTGGAGGATGGCCGCAC--TCTCTGACTAGA 584648 Query 22397 ACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 | || || ||||| ||||| | || || || | || |||| || ||| Sbjct 584647 ATATCCAGAAAGAGTCCACTCTGCACTTGGTGCTTCGTCTGCGAGGTGGT 584598 >seq265 Length=2261556 Score = 98.7 bits (108), Expect = 8e-16 Identities = 153/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| | ||||| || || |||| || || || ||| || Sbjct 840913 AAGATGCAGATTTTCGTGAAAACCCTTACCGGGAAGACCATCACCCTCGAGGTTGAACCC 840972 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 840973 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 841032 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || ||||| ||||| || | || ||| || || | || || ||| Sbjct 841033 CAGCAAAGACCGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 841092 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGA 22434 ||||||||||| || ||||| | ||| | || ||| || Sbjct 841093 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGA 841131 >seq331 Length=2147541 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| || ||||| || ||||| || || |||| || | | ||| || Sbjct 851239 AAGATGCAGATTTTCGTGAAAACCTTTACCGGGAAGACCATCACCCTCAAGGCTGAACCC 851298 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 851299 TCGGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 851358 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | | || ||||| ||||| || | || ||| || || | || || ||| Sbjct 851359 CAGCAAAGACAGATCTTTGCTGGCAAGCAACTGGAAGATGGACGTACTTTGTCTGACTAC 851418 Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 851419 AACATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 851469 >seq647 Length=1105866 Score = 95.1 bits (104), Expect = 1e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275 |||||||| ||||| | |||| | || || || || ||||||||||| | ||| || Sbjct 850048 AAGATGCAGATTTTCATGGAAACGCTTACTGGGAAGACCGTCACTCTTGAGGCTGAACCC 850107 Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335 | ||||| | || || | || || || || || ||||| || ||||| || ||| Sbjct 850108 TCAGATACAATAGAAAATGTAAAGGTCAAGATCCAGGATAAGGAAGGAATTCCTCCTGAT 850167 Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 || ||| | || || ||| | ||||| || | || ||| ||||| | || || ||| Sbjct 850168 CAGCAAAGACTGATCTTTACTGGCAAGCAACTGGAAGATGGACGCACTTTGTCTGACTAC 850227 Query 22396 AACATTCAAAAAGAATCCAC 22415 ||||||||||| || ||||| Sbjct 850228 AACATTCAAAAGGAGTCCAC 850247 >seq56 Length=5443799 Score = 93.3 bits (102), Expect = 4e-14 Identities = 149/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 |||||| || ||||| || ||| | || || || || |||| || || || || ||| Sbjct 2722716 AGATGCGGATCTTTGTGAAGACTCTGACGGGCAAGACCATCACACTGGAGGTTGAGCCCA 2722657 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACC---CG 22333 || ||| |||| || | ||| ||||| |||||||||||||| |||||||| | Sbjct 2722656 GTGACACCATGGAGAATGTTAAAGCTAAAATCCAAGACAAGGAGGGCATTCCACCTGACC 2722597 Query 22334 ATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATT 22393 | || || | ||| || ||||| ||||||||| | |||||| | |||| || | Sbjct 2722596 AGCAGCAGCATCTGATTTTTGCAGGCAAACAGCTGGAGGATATC-------TCTCAGACT 2722544 Query 22394 ACAACATTCAAAAAGAATCCACCATACATTTAGT 22427 | || || | ||||| |||||| | || || || Sbjct 2722543 ATAATATCTAGAAAGAGTCCACCCTGCACTTGGT 2722510 >seq808 Length=762264 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277 |||||| ||||| | ||||| | || || || || |||| || || || ||| || | Sbjct 447811 GATGCAGATTTTCATGAAAACCCTTACTGGGAAGACCATCACCCTCGAGGTTGAACCCTC 447870 Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337 ||||| | || || | || || || || || ||||| || ||||| || ||||| Sbjct 447871 AGATACAATAGAAAATGTAAAGGCCAAGATCCAGGATAAGGAAGGAATTCCTCCTGATCA 447930 Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397 ||| | || || ||||| ||||| || | || ||| | | | | || || ||||| Sbjct 447931 GCAAAGACTGATCTTTGCTGGCAAGCAACTGGAAGATGGACATATCTTGTCTGACTACAA 447990 Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||||||| || ||||| | ||| | || ||| || | || || ||| Sbjct 447991 CATTCAAAAGGAGTCCACTCTTCATCTTGTGTTGAGACTTCGTGGTGGT 448039 >seq45 Length=5545317 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/200 (71%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 22217 AGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCA 22276 ||||||| |||||||| || || | || || || || |||| || || || || | Sbjct 1737898 AGATGCAGATTTTTGTGAAGACCCTGACAGGCAAGACCATCACACTCGAGGTC--AAGC- 1737842 Query 22277 CCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATC 22336 | || ||| || || ||||| ||||| |||||||||||||| || ||||| || | Sbjct 1737841 CTGACACCACTGAGAATGTCAAAGCTAAAATCCAAGACAAGGAGGGCATCCCACCTGACC 1737782 Query 22337 AACAACGTCTTATATTTG-CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395 | || |||| || |||| ||| ||||| | |||||| | ||| |||| || || Sbjct 1737781 AGCAGAGTCTGATTTTTGTGGGGCCAACAGCTGGAGGATGGTCACACTCTCTCAGACTAT 1737722 Query 22396 AACATTCAAAAAGAATCCAC 22415 || || || ||||| ||||| Sbjct 1737721 AATATCCAGAAAGAGTCCAC 1737702 >seq304 Length=2338375 Score = 82.4 bits (90), Expect = 6e-11 Identities = 92/122 (75%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 22295 TCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTG 22354 ||||| ||||| |||||||||||||| || ||| | || || || ||||| || |||| Sbjct 1425140 TCAAAGCTAAAATACAAGACAAGGAGGGCATCCCATCTGACCAGCAGCGTCTGATTTTTG 1425199 Query 22355 CCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCA 22414 | ||||||||| | || ||| | |||| |||| || || || || || ||||| | || Sbjct 1425200 CAGGCAAACAGCTGGAAGATGGCAGCAC--TCTCGGACTATAATATCCATAAAGAGTGCA 1425257 Query 22415 CC 22416 || Sbjct 1425258 CC 1425259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419689271041615