Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_008717.1
Length=36415
Score E
Sequences producing significant alignments: (Bits) Value
seq5790 123 6e-24
>seq5790
Length=1233
Score = 123 bits (136), Expect = 6e-24
Identities = 196/274 (72%), Gaps = 14/274 (5%)
Strand=Plus/Plus
Query 14345 ATCACGTTCTGGGTCAACCGCCTGGCGCAGTGGATGT--TCTA---CGGCGCGTGCGACC 14399
||| ||||||||||| | | | |||| | |||| | |||| ||| ||| ||| |
Sbjct 879 ATCTCGTTCTGGGTCGA--GAC--GCGCCG-GGATCTCGTCTATTTCGGGGCGATCGATC 933
Query 14400 CGTCCCTGGGTAAGCAAGGTTCCAG--CCGCGACCCCAGCGCCATCCTGGTGGGTGGGTT 14457
|||| || || |||| || | || ||| ||||| |||||||||| | |||||| |
Sbjct 934 CGTCGCTCGGAAAGC--GGAACAAGAGCCGTGACCCATCCGCCATCCTGATCGGTGGGAT 991
Query 14458 CAACCGGGAGACAGGCGTCCTGGACGTGGTCGAGGCCGCCATCCGCAAACGCCTGCCGGA 14517
||||| ||| ||| |||||||||||||||| | |||||| || ||||||||
Sbjct 992 GGACCGGCTGACCGGCAAGATGGACGTGGTCGAGGCATCAATCCGCCGCCGTCTGCCGGA 1051
Query 14518 CAAGATCATCGAGGACATCATCGCCATGCAGCGGGCCTATCACTGCCTGGTGTGGGGCGT 14577
|| |||||||| ||| | |||||| | ||||| | |||| || || ||||| |||
Sbjct 1052 CATGATCATCGCGGATACCATCGCGCTTCAGCGAGAGTATCGGTGTCTCTTGTGGTTCGT 1111
Query 14578 TGAGGCGGTCCAGTTCCAGGAGTTCCTGCGCACC 14611
|| ||||||||||||| |||||| | |||
Sbjct 1112 GGAAAGCATCCAGTTCCAGGAATTCCTGAGGACC 1145
Score = 107 bits (118), Expect = 4e-19
Identities = 175/250 (70%), Gaps = 4/250 (2%)
Strand=Plus/Plus
Query 13691 GAGGCGATCAAGGCGGAGCTGGAGTTCAACCCGCGCCT--GGCCATGGACTTCCCCCAGG 13748
||||| || ||||| |||||| ||||||||| || || | ||| ||||| | |
Sbjct 302 GAGGCCATTAAGGCCGAGCTGACCAACAACCCGCGGCTTCGGTC--GGATTTCCCGGATG 359
Query 13749 GCGCCGGCAAGGGCCGCGTTTGGCAGGTCGGCACCATCGTTACGGCGAACGATGCCAAGG 13808
||||||||| || || |||| | ||| || |||| | | | | | |
Sbjct 360 CGTGCGGCAAGGGGCGGGTCTGGCGCGAAGGCCAGATTATTACCCGTACCAACGTAATGA 419
Query 13809 TCCAGGTCTTCGGCTCCGGCAAGCGGATGCGCGGCCTTCGACACGGCCCGCACCGTCCTG 13868
||| || | ||||| ||||| || | |||||||| | |||||||| || |||| || |
Sbjct 420 TCCTGGGCCTCGGCGCCGGCCAGAAGGTGCGCGGCTTGCGACACGGTCCATACCGACCCG 479
Query 13869 ACCTGGTGATCGGCGACGACCTGGAGAACGACGAGAACGTCCGCAGCCCGGAGCAGCGCG 13928
|||| ||||| ||||||||||||||||||||| |||||| ||||| ||||| |
Sbjct 480 ACCTTCTGATCTTCGACGACCTGGAGAACGACGAAGCTGTCCGCGTGCCGGATCAGCGGG 539
Query 13929 ACAAGCTGGA 13938
|||| ||||
Sbjct 540 ACAAATTGGA 549
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 116395934409854
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |