Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq5307 143 5e-29
seq717 134 3e-26
seq45 125 1e-23
seq304 122 2e-22
seq298 120 6e-22
seq56 111 3e-19
seq13 104 4e-17
seq73 102 2e-16
seq210 89.7 9e-13
>seq5307
Length=1324
Score = 143 bits (158), Expect = 5e-29
Identities = 168/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||||||||| ||||||||||| ||||| ||||| || |||
Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | ||| || || || || || || | || ||||| |||||
Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| || || || ||| | ||| || ||||| | || ||
Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||||| || ||||| |||||||| || || ||||||||
Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729
>seq717
Length=839118
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| ||| | || ||||| || | ||||| ||
Sbjct 563461 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCC 563520
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || || ||||| ||||| ||||| |||||||||||
Sbjct 563521 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 563580
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| ||| || ||||| | || || || | |||||||| ||
Sbjct 563581 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 563640
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || || ||||||||
Sbjct 563641 CCCGTCAGGGTCTTCACAAAGATCTGCAT 563669
>seq45
Length=5545317
Score = 125 bits (138), Expect = 1e-23
Identities = 156/210 (74%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| ||||| || ||||| || ||||| ||
Sbjct 1737690 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCC 1737749
Query 68313 AACTGCTT-CCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371
| ||| | ||| | || || || || || ||||| ||||| ||||| |||||||||||
Sbjct 1737750 AGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 1737809
Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431
|| || || ||||| ||| ||||||| | | || || || | |||||||| ||
Sbjct 1737810 GATTTTAGCTTTGACATTCTCAGTGGTGTCAG--GCTT-GACCTCGAGTGTGATGGTCTT 1737866
Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || |||||||| || || ||||||||
Sbjct 1737867 GCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896
>seq304
Length=2338375
Score = 122 bits (134), Expect = 2e-22
Identities = 156/211 (74%), Gaps = 7/211 (3%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
||||||| || ||| ||||||| ||||| ||||| || ||||||| || ||||||||
Sbjct 1425270 ACCAAGTACAGGGTGCACTCTTTATGGATATTATAGTCCGAGAGTG--CTGCCATCTTCC 1425213
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || || || || || | || ||||| | ||| ||||| |||||||||||
Sbjct 1425212 AGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGT 1425153
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC--TACTTCCAAGGTGATGGTTT 68430
|| || || ||||| | ||| | ||||| ||| | ||| || |||||||| |
Sbjct 1425152 ATTTTAGCTTTGACAGTCTCAGTAGTGTC-CCTGGGCCCGGACT--CAGTGTGATGGTCT 1425096
Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||| | |||||||| || || ||||||||
Sbjct 1425095 TGCCCATCAGGGTCTTCACAAAGATCTGCAT 1425065
>seq298
Length=2265018
Score = 120 bits (132), Expect = 6e-22
Identities = 164/227 (72%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | |||||||| || ||||||||||| ||||| || || || |||
Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGAG 584658
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|||| | ||||| || | ||| || || | || || || | || ||||| |||||
Sbjct 584659 AGTG--CGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||| ||||||||||| || || || ||||| ||| || ||||| | || ||
Sbjct 584717 ATGCCCTCCTTGTCTTGGAT-TTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| || ||||| |||||||| || || |||||||
Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822
>seq56
Length=5443799
Score = 111 bits (122), Expect = 3e-19
Identities = 154/213 (72%), Gaps = 12/213 (6%)
Strand=Plus/Plus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAG-TGTCCTCCCATCTTC 68311
|||||||| || ||||||||||| | ||| ||||| || ||||| | ||||||
Sbjct 2722510 ACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTCTGAGAGATATCCTCC------- 2722562
Query 68312 TAACTGCTTCCCGGCGAATATGAGT--CTT-TGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368
| ||| || || || || || || || || ||||| ||||||||||| ||||||||
Sbjct 2722563 -AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2722621
Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428
||| || || || || || ||| |||||||| | || || |||| ||||||||
Sbjct 2722622 TTGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGT 2722681
Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || ||||| || || ||| ||||
Sbjct 2722682 CTTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714
>seq13
Length=8615514
Score = 104 bits (114), Expect = 4e-17
Identities = 148/206 (72%), Gaps = 2/206 (1%)
Strand=Plus/Plus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGA-GTGTCCTCCCATCTTCTA 68313
|||||| || ||||||||||| |||| ||||| || |||| | || | ||||| | |
Sbjct 1044042 CAAGTGCAGGGTGGACTCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACA 1044101
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|| || || || ||||| || || ||||| | ||| ||||| |||||||||| |
Sbjct 1044102 GCTATTTGCCTGCCAATATCAGGTGCTGCTGGTCAGATGGGGTGCCT-CCTTGTCTTGGA 1044160
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || || ||||| ||| || ||||| | || || || | |||||||| || |
Sbjct 1044161 TTTTAGCTTTGACATTCTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGC 1044220
Query 68434 CCGTGAGGGTCTTGACGAATATCTGC 68459
|||| |||||||| || || ||||||
Sbjct 1044221 CCGTCAGGGTCTTCACAAAGATCTGC 1044246
>seq73
Length=4601553
Score = 102 bits (112), Expect = 2e-16
Identities = 148/209 (71%), Gaps = 4/209 (2%)
Strand=Plus/Minus
Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312
|||||||| || ||||||||||| ||||| || || | ||||| |||| ||| ||
Sbjct 4090082 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGTCC----ATCCTCC 4090027
Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372
| ||| || || | || || || | ||||| ||||| ||||| |||||||||||
Sbjct 4090026 AGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 4089967
Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432
|| || || ||||| || | ||||| | || || || | |||||||| ||
Sbjct 4089966 ATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTTG 4089907
Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| ||||||| || || ||||||||
Sbjct 4089906 CCCGTCAGGGTCTACACAAAGATCTGCAT 4089878
>seq210
Length=3024228
Score = 89.7 bits (98), Expect = 9e-13
Identities = 144/207 (70%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314
|||||| || ||||||| ||| | | | || || || ||||| || |||| || |
Sbjct 2224354 CAAGTGCAGAGTGGACTGTTTCTAGTTATTGTAGTCTGAGAGAGTGTGGACATCCTCCAG 2224413
Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374
|| || || | || | || | || ||||| ||||| ||||| ||||||||||| ||
Sbjct 2224414 TTGTTTGCCCACAAAAACCAGACACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT 2224473
Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434
|| || ||||| ||| || ||||| | || || || | || ||||| || |
Sbjct 2224474 TTTAGCTTTGACATTCTCAATAGTGTCACTAGGCTCGACCTCGAGTGTTATGGTCTTGCT 2224533
Query 68435 CGTGAGGGTCTTGACGAATATCTGCAT 68461
|| |||||||| ||||| ||||||||
Sbjct 2224534 GGTCAGGGTCTTCACGAAGATCTGCAT 2224560
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921535179960120
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