Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5307 143 5e-29 seq717 134 3e-26 seq45 125 1e-23 seq304 122 2e-22 seq298 120 6e-22 seq56 111 3e-19 seq13 104 4e-17 seq73 102 2e-16 seq210 89.7 9e-13 >seq5307 Length=1324 Score = 143 bits (158), Expect = 5e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||||||||| ||||||||||| ||||| ||||| || ||| Sbjct 955 CCACCTCGCAGACGAAGCACCAAGTGTAGAGTGGACTCTTTCTGGATATTATAGTCTGAG 896 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||| || || || || || || | || ||||| ||||| Sbjct 895 AGAGTGCGGCCATCCTCCAGCTGTTTGCCCGCAAAAATCAGACGCTGCTGGTCAGGTGGG 836 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || || ||| | ||| || ||||| | || || Sbjct 835 ATGCCCTCCTTGTCTTGGATTTTAGCTTTGGCATTCTCAATAGTGTCACTGGGCTCGACC 776 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| || ||||| |||||||| || || |||||||| Sbjct 775 TCAAGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 729 >seq717 Length=839118 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| ||||| ||| | || ||||| || | ||||| || Sbjct 563461 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTACAGTCTGAGAGAGTGCGGCCATCCTCC 563520 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || || || || ||||| ||||| ||||| ||||||||||| Sbjct 563521 AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 563580 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| ||| || ||||| | || || || | |||||||| || Sbjct 563581 ATTTTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACCTCAAGTGTGATGGTCTTG 563640 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || || |||||||| Sbjct 563641 CCCGTCAGGGTCTTCACAAAGATCTGCAT 563669 >seq45 Length=5545317 Score = 125 bits (138), Expect = 1e-23 Identities = 156/210 (74%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| ||||| ||||| || ||||| || ||||| || Sbjct 1737690 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTATAGTCTGAGAGAGTGTGACCATCCTCC 1737749 Query 68313 AACTGCTT-CCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | ||| | ||| | || || || || || ||||| ||||| ||||| ||||||||||| Sbjct 1737750 AGCTGTTGGCCCCACAAAAATCAGACTCTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTG 1737809 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 || || || ||||| ||| ||||||| | | || || || | |||||||| || Sbjct 1737810 GATTTTAGCTTTGACATTCTCAGTGGTGTCAG--GCTT-GACCTCGAGTGTGATGGTCTT 1737866 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || || |||||||| Sbjct 1737867 GCCTGTCAGGGTCTTCACAAAAATCTGCAT 1737896 >seq304 Length=2338375 Score = 122 bits (134), Expect = 2e-22 Identities = 156/211 (74%), Gaps = 7/211 (3%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||||| || ||| ||||||| ||||| ||||| || ||||||| || |||||||| Sbjct 1425270 ACCAAGTACAGGGTGCACTCTTTATGGATATTATAGTCCGAGAGTG--CTGCCATCTTCC 1425213 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || || || || || | || ||||| | ||| ||||| ||||||||||| Sbjct 1425212 AGCTGTTTGCCTGCAAAAATCAGACGCTGCTGGTCAGATGGGATGCCCTCCTTGTCTTGT 1425153 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC--TACTTCCAAGGTGATGGTTT 68430 || || || ||||| | ||| | ||||| ||| | ||| || |||||||| | Sbjct 1425152 ATTTTAGCTTTGACAGTCTCAGTAGTGTC-CCTGGGCCCGGACT--CAGTGTGATGGTCT 1425096 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||| | |||||||| || || |||||||| Sbjct 1425095 TGCCCATCAGGGTCTTCACAAAGATCTGCAT 1425065 >seq298 Length=2265018 Score = 120 bits (132), Expect = 6e-22 Identities = 164/227 (72%), Gaps = 3/227 (1%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | |||||||| || ||||||||||| ||||| || || || ||| Sbjct 584599 CCACCTCGCAGACGAAGCACCAAGTGCAGAGTGGACTCTTTCTGGATATTCTAGTCAGAG 584658 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 |||| | ||||| || | ||| || || | || || || | || ||||| ||||| Sbjct 584659 AGTG--CGGCCATCCTCCAGCTGTTTGCCCACAAAAATCAGACGCTGCTGGTCAGGTGGG 584716 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||| ||||||||||| || || || ||||| ||| || ||||| | || || Sbjct 584717 ATGCCCTCCTTGTCTTGGAT-TTAGCTTTGACATTCTCAATAGTGTCACTGGGCTCGACC 584775 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| || ||||| |||||||| || || ||||||| Sbjct 584776 TCAGGTGTGATGGTCTTGCCCGTCAGGGTCTTCACAAAGGTCTGCAT 584822 >seq56 Length=5443799 Score = 111 bits (122), Expect = 3e-19 Identities = 154/213 (72%), Gaps = 12/213 (6%) Strand=Plus/Plus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAG-TGTCCTCCCATCTTC 68311 |||||||| || ||||||||||| | ||| ||||| || ||||| | |||||| Sbjct 2722510 ACCAAGTGCAGGGTGGACTCTTTCTAGATATTATAGTCTGAGAGATATCCTCC------- 2722562 Query 68312 TAACTGCTTCCCGGCGAATATGAGT--CTT-TGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 | ||| || || || || || || || || ||||| ||||||||||| |||||||| Sbjct 2722563 -AGCTGTTTGCCTGCAAAAATCAGATGCTGCTGCTGGTCAGGTGGAATGCCCTCCTTGTC 2722621 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || || || || ||| |||||||| | || || |||| |||||||| Sbjct 2722622 TTGGATTTTAGCTTTAACATTCTCCATGGTGTCACTGGGCTCAACCTCCAGTGTGATGGT 2722681 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||| || ||||| || || ||| |||| Sbjct 2722682 CTTGCCCGTCAGAGTCTTCACAAAGATCCGCAT 2722714 >seq13 Length=8615514 Score = 104 bits (114), Expect = 4e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGA-GTGTCCTCCCATCTTCTA 68313 |||||| || ||||||||||| |||| ||||| || |||| | || | ||||| | | Sbjct 1044042 CAAGTGCAGGGTGGACTCTTTCAGGATATTATAGTCTGAGAAGAGTGCAGCCATCCTACA 1044101 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 || || || || ||||| || || ||||| | ||| ||||| |||||||||| | Sbjct 1044102 GCTATTTGCCTGCCAATATCAGGTGCTGCTGGTCAGATGGGGTGCCT-CCTTGTCTTGGA 1044160 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 | || || ||||| ||| || ||||| | || || || | |||||||| || | Sbjct 1044161 TTTTAGCTTTGACATTCTCAATAGTGTCCCTGGGCTCAACCTCAAGTGTGATGGTCTTGC 1044220 Query 68434 CCGTGAGGGTCTTGACGAATATCTGC 68459 |||| |||||||| || || |||||| Sbjct 1044221 CCGTCAGGGTCTTCACAAAGATCTGC 1044246 >seq73 Length=4601553 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||||||| || ||||||||||| ||||| || || | ||||| |||| ||| || Sbjct 4090082 ACCAAGTGCAGAGTGGACTCTTTCTGGATATTGTAGGCTGAGAGAGTCC----ATCCTCC 4090027 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | ||| || || | || || || | ||||| ||||| ||||| ||||||||||| Sbjct 4090026 AGCTGTTTGCCAACAAAAATCAGATGCAGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGG 4089967 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 || || || ||||| || | ||||| | || || || | |||||||| || Sbjct 4089966 ATTTTAGCTTTGACATTCTTAGTAGTGTCACTGGGCTCGACCTCGAGTGTGATGGTCTTG 4089907 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| ||||||| || || |||||||| Sbjct 4089906 CCCGTCAGGGTCTACACAAAGATCTGCAT 4089878 >seq210 Length=3024228 Score = 89.7 bits (98), Expect = 9e-13 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 68255 CAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAA 68314 |||||| || ||||||| ||| | | | || || || ||||| || |||| || | Sbjct 2224354 CAAGTGCAGAGTGGACTGTTTCTAGTTATTGTAGTCTGAGAGAGTGTGGACATCCTCCAG 2224413 Query 68315 CTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAAT 68374 || || || | || | || | || ||||| ||||| ||||| ||||||||||| || Sbjct 2224414 TTGTTTGCCCACAAAAACCAGACACTGCTGGTCAGGTGGGATGCCCTCCTTGTCTTGGAT 2224473 Query 68375 CTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCC 68434 || || ||||| ||| || ||||| | || || || | || ||||| || | Sbjct 2224474 TTTAGCTTTGACATTCTCAATAGTGTCACTAGGCTCGACCTCGAGTGTTATGGTCTTGCT 2224533 Query 68435 CGTGAGGGTCTTGACGAATATCTGCAT 68461 || |||||||| ||||| |||||||| Sbjct 2224534 GGTCAGGGTCTTCACGAAGATCTGCAT 2224560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921535179960120