Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06]
7,571 sequences; 2,236,581,172 total letters
Query= NC_009127.1
Length=295146
Score E
Sequences producing significant alignments: (Bits) Value
seq927 154 3e-32
seq861 84.2 4e-11
>seq927
Length=612318
Score = 154 bits (170), Expect = 3e-32
Identities = 327/480 (68%), Gaps = 16/480 (3%)
Strand=Plus/Minus
Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482
|| || ||||| || || ||| |||||||||||||| ||| ||| |||| |
Sbjct 154343 CTTGCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGGTTTAGC 154284
Query 42483 AAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540
|||| | ||| ||| || || ||||| ||||| |||||||| || ||||| || |
Sbjct 154283 CAAGAAATTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGA-A 154227
Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAA---CACGTACATCCTGGATCCCGTCG 42597
|| || |||||| |||| | || ||||| |||||| || ||| || |
Sbjct 154226 ACAAACATTCTGAGATGTAT---AGTCTCCTCAATGACACGTATATTAAAGATTCCAAGG 154170
Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657
| | | | || ||||| ||||| ||||| ||||| || ||||||||||||| || |
Sbjct 154169 AAAGGGAGTGTCTCTTCAACGCCATTGAGACAATGCCTTGTGTCAAGAAGAAGGCAGATT 154110
Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717
|||| | ||||| | | || || || | || || | | ||||| |||
Sbjct 154109 GGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTATGGAGAACGTGTTGTAGCTTTTG 154050
Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777
|||| || || || |||||||| || || | || || || || |||||||||||| |
Sbjct 154049 CCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAAT 153990
Query 42778 -AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836
||| | |||| | || ||||| || || |||||||| || ||||| || ||||| |
Sbjct 153989 GAGGACT-GATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAGATGAGGGTTTA 153931
Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896
|| | |||||||||||||| ||||| | ||||| | ||||| || ||| || ||
Sbjct 153930 CACTGTGACTTTGCCTGCCTGATGTTC---AAACACCTGATACACAAACCTTCGGAGCAG 153874
>seq861
Length=819057
Score = 84.2 bits (92), Expect = 4e-11
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755
|| || ||| |||| |||||| | || || || || | ||||||||||| | || ||
Sbjct 774569 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCGGGATCTTTTGCT 774628
Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814
| || |||||||| ||| | | |||| | ||||| |||||||| || || || |||||
Sbjct 774629 GCTATATTCTGGCTAAAGAAAAGAGGTCT-TATGCCTGGACTCACTTTTTCCAATGAACT 774687
Query 42815 CATCAGCAGGGACGA 42829
||||||||| || ||
Sbjct 774688 CATCAGCAGAGATGA 774702
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 944249830098960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |