Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hipposideros_20armiger_20[refseq_20GCF_5F001890085.1_202016-12-06] 7,571 sequences; 2,236,581,172 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq927 154 3e-32 seq861 84.2 4e-11 >seq927 Length=612318 Score = 154 bits (170), Expect = 3e-32 Identities = 327/480 (68%), Gaps = 16/480 (3%) Strand=Plus/Minus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||| || || ||| |||||||||||||| ||| ||| |||| | Sbjct 154343 CTTGCTTTCTTTGCTGCGAGTGATGGCATAGTCAATGAAAACTTGGTGGAGCGGTTTAGC 154284 Query 42483 AAAGAGGTGCAG--TACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGA 42540 |||| | ||| ||| || || ||||| ||||| |||||||| || ||||| || | Sbjct 154283 CAAGAAATTCAGATTACA--GAAGCCCGCTGTTTCTATGGCTTCCAAATTGCCATGGA-A 154227 Query 42541 ACGTGCACTCTGAGGTGTACGCCAAACTGCTCAA---CACGTACATCCTGGATCCCGTCG 42597 || || |||||| |||| | || ||||| |||||| || ||| || | Sbjct 154226 ACAAACATTCTGAGATGTAT---AGTCTCCTCAATGACACGTATATTAAAGATTCCAAGG 154170 Query 42598 AGCGTAACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACT 42657 | | | | || ||||| ||||| ||||| ||||| || ||||||||||||| || | Sbjct 154169 AAAGGGAGTGTCTCTTCAACGCCATTGAGACAATGCCTTGTGTCAAGAAGAAGGCAGATT 154110 Query 42658 GGGCGCTCAACTGGATCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 |||| | ||||| | | || || || | || || | | ||||| ||| Sbjct 154109 GGGCCTTGCGTTGGATTGGGGACAAAGAGGCTACCTATGGAGAACGTGTTGTAGCTTTTG 154050 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 |||| || || || |||||||| || || | || || || || |||||||||||| | Sbjct 154049 CCGCAGTGGAAGGAATCTTCTTTTCTGGTTCTTTTGCATCGATATTCTGGCTCAAGAAAT 153990 Query 42778 -AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTG 42836 ||| | |||| | || ||||| || || |||||||| || ||||| || ||||| | Sbjct 153989 GAGGACT-GATGTCTGGCCTCACATTTTCCAACGAACTTATTAGCAGAGATGAGGGTTTA 153931 Query 42837 CATAGGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCCCTCGAAGGAG 42896 || | |||||||||||||| ||||| | ||||| | ||||| || ||| || || Sbjct 153930 CACTGTGACTTTGCCTGCCTGATGTTC---AAACACCTGATACACAAACCTTCGGAGCAG 153874 >seq861 Length=819057 Score = 84.2 bits (92), Expect = 4e-11 Identities = 101/135 (75%), Gaps = 2/135 (1%) Strand=Plus/Plus Query 42696 GGCGAGAGGCTGGTAGCCTTTACCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCC 42755 || || ||| |||| |||||| | || || || || | ||||||||||| | || || Sbjct 774569 GGGGAAAGGGTGGTGGCCTTTGCTGCTGTAGAAGGAGTTTTCTTCTCGGGATCTTTTGCT 774628 Query 42756 TCCATCTTCTGGCTCAAGCAGA-AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACT 42814 | || |||||||| ||| | | |||| | ||||| |||||||| || || || ||||| Sbjct 774629 GCTATATTCTGGCTAAAGAAAAGAGGTCT-TATGCCTGGACTCACTTTTTCCAATGAACT 774687 Query 42815 CATCAGCAGGGACGA 42829 ||||||||| || || Sbjct 774688 CATCAGCAGAGATGA 774702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944249830098960